RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 LPAR4Q99677 370 aa12.15□□□□□ -0.46
CHD3-206ENST00000452447 RNF32Q9H0A6 362 aa12.15□□□□□ -0.46
CHD3-206ENST00000452447 PELI2Q9HAT8 420 aa12.15□□□□□ -0.46
CHD3-206ENST00000452447 POPDC3Q9HBV1 291 aa12.15□□□□□ -0.46
CHD3-206ENST00000452447 CRYBG3Q68DQ2 2970 aa12.15□□□□□ -0.47
CHD3-206ENST00000452447 OR5H15A6NDH6 313 aa12.14□□□□□ -0.47
CHD3-206ENST00000452447 MAGEB17A8MXT2 336 aa12.14□□□□□ -0.47
CHD3-206ENST00000452447 EIF3HO15372 352 aaKnown RBP eCLIP12.14□□□□□ -0.47
CHD3-206ENST00000452447 CHST10O43529 356 aa12.14□□□□□ -0.47
CHD3-206ENST00000452447 PIAS1O75925 651 aa12.14□□□□□ -0.47
CHD3-206ENST00000452447 FHP07954 510 aa12.14□□□□□ -0.47
CHD3-206ENST00000452447 ZNF888P0CJ79 500 aaPredicted RBP12.14□□□□□ -0.47
CHD3-206ENST00000452447 GNAZP19086 355 aa12.14□□□□□ -0.47
CHD3-206ENST00000452447 CASQ1P31415 396 aa12.14□□□□□ -0.47
CHD3-206ENST00000452447 HNF4AP41235 474 aa12.14□□□□□ -0.47
CHD3-206ENST00000452447 REEP5Q00765 189 aa12.14□□□□□ -0.47
CHD3-206ENST00000452447 CBLBQ13191 982 aa12.14□□□□□ -0.47
CHD3-206ENST00000452447 INAQ16352 499 aa12.14□□□□□ -0.47
CHD3-206ENST00000452447 SFT2D3Q587I9 215 aa12.14□□□□□ -0.47
CHD3-206ENST00000452447 NXPE4Q6UWF7 544 aa12.14□□□□□ -0.47
CHD3-206ENST00000452447 PLPP5Q8NEB5 264 aa12.14□□□□□ -0.47
CHD3-206ENST00000452447 TSPAN17Q96FV3 270 aa12.14□□□□□ -0.47
CHD3-206ENST00000452447 ZNF354BQ96LW1 612 aa12.14□□□□□ -0.47
CHD3-206ENST00000452447 SPNS1Q9H2V7 528 aa12.14□□□□□ -0.47
CHD3-206ENST00000452447 KCNK13Q9HB14 408 aa12.14□□□□□ -0.47
CHD3-206ENST00000452447 ABI3Q9P2A4 366 aa12.14□□□□□ -0.47
CHD3-206ENST00000452447 UTP11Q9Y3A2 253 aaKnown RBP12.14□□□□□ -0.47
CHD3-206ENST00000452447 WIPF3A6NGB9 483 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 NCF1BA6NI72 391 aaPredicted RBP12.13□□□□□ -0.47
CHD3-206ENST00000452447 NCF1CA8MVU1 366 aaPredicted RBP12.13□□□□□ -0.47
CHD3-206ENST00000452447 PSMD12O00232 456 aaPredicted RBP12.13□□□□□ -0.47
CHD3-206ENST00000452447 RAD51CO43502 376 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 H2AFYO75367 372 aaKnown RBP12.13□□□□□ -0.47
CHD3-206ENST00000452447 WDR47O94967 919 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 LDLRP01130 860 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 NCF1P14598 390 aaPredicted RBP12.13□□□□□ -0.47
CHD3-206ENST00000452447 OR4D2P58180 307 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 OLR1P78380 273 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 RHAGQ02094 409 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 C2orf54Q08AI8 447 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 USP10Q14694 798 aaKnown RBP12.13□□□□□ -0.47
CHD3-206ENST00000452447 PAPD4Q6PIY7 484 aaKnown RBP12.13□□□□□ -0.47
CHD3-206ENST00000452447 C3orf62Q6ZUJ4 267 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 AMER2Q8N7J2 671 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 M1APQ8TC57 530 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 UTP15Q8TED0 518 aaKnown RBP12.13□□□□□ -0.47
CHD3-206ENST00000452447 RHBDF1Q96CC6 855 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 CPNE1Q99829 537 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 SLX1AQ9BQ83 275 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 DERL2Q9GZP9 239 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 CAB39LQ9H9S4 337 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 SMYD2Q9NRG4 433 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 LANCL2Q9NS86 450 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 OSGIN2Q9Y236 505 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 MTO1Q9Y2Z2 717 aaKnown RBP12.13□□□□□ -0.47
CHD3-206ENST00000452447 TEX15Q9BXT5 2789 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 TCRBV9S1A1TA0A576 114 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 CXorf49A8MYA2 514 aaPredicted RBP12.13□□□□□ -0.47
CHD3-206ENST00000452447 E2F3O00716 465 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 LRRTM2O43300 516 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 PRAMEF2O60811 474 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 B4GALT2O60909 372 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 RASAL1O95294 804 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 B3GALT4O96024 378 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 SERPINA6P08185 405 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 STMN1P16949 149 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 GDF5P43026 501 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 RAB8AP61006 207 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 TGFBIQ15582 683 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 MEP1AQ16819 746 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 ACER2Q5QJU3 275 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 FCRLBQ6BAA4 426 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 HIST2H2BCQ6DN03 193 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 CTAGE3PQ8IX95 158 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 ANKRD53Q8N9V6 530 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 TTLQ8NG68 377 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 TSLPQ969D9 159 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 PTCHD1Q96NR3 888 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 TAAR6Q96RI8 345 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 MCMBPQ9BTE3 642 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 UNKQ9C0B0 810 aaKnown RBP12.13□□□□□ -0.47
CHD3-206ENST00000452447 SLC6A16Q9GZN6 736 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 RAB17Q9H0T7 212 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 CNOT10Q9H9A5 744 aaKnown RBP12.13□□□□□ -0.47
CHD3-206ENST00000452447 CLK4Q9HAZ1 481 aaKnown RBP12.13□□□□□ -0.47
CHD3-206ENST00000452447 MMP25Q9NPA2 562 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 WWOXQ9NZC7 414 aa12.13□□□□□ -0.47
CHD3-206ENST00000452447 ITPR2Q14571 2701 aa12.12□□□□□ -0.47
CHD3-206ENST00000452447 PHGDHO43175 533 aaKnown RBP12.12□□□□□ -0.47
CHD3-206ENST00000452447 PRMT3O60678 531 aa12.12□□□□□ -0.47
CHD3-206ENST00000452447 CRYABP02511 175 aaKnown RBP12.12□□□□□ -0.47
CHD3-206ENST00000452447 GSTA2P09210 222 aa12.12□□□□□ -0.47
CHD3-206ENST00000452447 CCDC166P0CW27 439 aa12.12□□□□□ -0.47
CHD3-206ENST00000452447 C1GALT1C1LP0DN25 315 aa12.12□□□□□ -0.47
CHD3-206ENST00000452447 GP5P40197 560 aa12.12□□□□□ -0.47
CHD3-206ENST00000452447 PLTPP55058 493 aa12.12□□□□□ -0.47
CHD3-206ENST00000452447 PER3P56645 1201 aa12.12□□□□□ -0.47
CHD3-206ENST00000452447 TAS2R50P59544 299 aa12.12□□□□□ -0.47
CHD3-206ENST00000452447 ATP6V0D1P61421 351 aa12.12□□□□□ -0.47
CHD3-206ENST00000452447 STXBP1P61764 594 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms