RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 BTBD3Q9Y2F9 522 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 AP3M1Q9Y2T2 418 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 PCDHB14Q9Y5E9 798 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 PCDHGA4Q9Y5G9 962 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 CEP192Q8TEP8 1941 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 PRSS51A0A1B0GVH4 220 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 GSAPA4D1B5 854 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 C2orf74A8MZ97 194 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 B4DGG1 531 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 RFXANKO14593 260 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 BCAT2O15382 392 aaPredicted RBP13.62□□□□□ -0.23
USP39-207ENST00000450066 CAPN5O15484 640 aaPredicted RBP13.62□□□□□ -0.23
USP39-207ENST00000450066 ZW10O43264 779 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 FKBP9O95302 570 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 STAMBPO95630 424 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 HOXB9P17482 250 aaPredicted RBP13.62□□□□□ -0.23
USP39-207ENST00000450066 CSNK1EP49674 416 aaKnown RBP13.62□□□□□ -0.23
USP39-207ENST00000450066 ATXN3P54252 364 aaPredicted RBP13.62□□□□□ -0.23
USP39-207ENST00000450066 MTPNP58546 118 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 LRRC74AQ0VAA2 488 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 PDE7AQ13946 482 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 ADPRMQ3LIE5 342 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 ANXA8L1Q5VT79 327 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 ZFP1Q6P2D0 407 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 SDR16C5Q8N3Y7 309 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 VPS37AQ8NEZ2 397 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 LMX1AQ8TE12 382 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 ZUFSPQ96AP4 578 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 KCTD14Q9BQ13 255 aaPredicted RBP13.62□□□□□ -0.23
USP39-207ENST00000450066 INPP5KQ9BT40 448 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 SORBS1Q9BX66 1292 aaKnown RBP13.62□□□□□ -0.23
USP39-207ENST00000450066 LHX9Q9NQ69 397 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 SLC6A13Q9NSD5 602 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 ATAD3AQ9NVI7 634 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 KLHL20Q9Y2M5 609 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 KLK4Q9Y5K2 254 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 LAMA1P25391 3075 aa13.62□□□□□ -0.23
USP39-207ENST00000450066 ARHGAP10A1A4S6 786 aa13.61□□□□□ -0.23
USP39-207ENST00000450066 OR2A25A4D2G3 310 aa13.61□□□□□ -0.23
USP39-207ENST00000450066 YY2O15391 372 aa13.61□□□□□ -0.23
USP39-207ENST00000450066 SERPIND1P05546 499 aa13.61□□□□□ -0.23
USP39-207ENST00000450066 FURINP09958 794 aa13.61□□□□□ -0.23
USP39-207ENST00000450066 HOXB3P14651 431 aaPredicted RBP13.61□□□□□ -0.23
USP39-207ENST00000450066 GCKP35557 465 aa13.61□□□□□ -0.23
USP39-207ENST00000450066 GSTM5P46439 218 aa13.61□□□□□ -0.23
USP39-207ENST00000450066 PTDSS1P48651 473 aaKnown RBP13.61□□□□□ -0.23
USP39-207ENST00000450066 ARFIP1P53367 373 aa13.61□□□□□ -0.23
USP39-207ENST00000450066 RPS15AP62244 130 aaKnown RBP13.61□□□□□ -0.23
USP39-207ENST00000450066 C2orf80Q0P641 193 aa13.61□□□□□ -0.23
USP39-207ENST00000450066 SELPLGQ14242 412 aa13.61□□□□□ -0.23
USP39-207ENST00000450066 FXNQ16595 210 aa13.61□□□□□ -0.23
USP39-207ENST00000450066 SLC5A12Q1EHB4 618 aa13.61□□□□□ -0.23
USP39-207ENST00000450066 ANKRD26P1Q6NSI1 321 aa13.61□□□□□ -0.23
USP39-207ENST00000450066 TSSK4Q6SA08 328 aa13.61□□□□□ -0.23
USP39-207ENST00000450066 DNAJC14Q6Y2X3 702 aaPredicted RBP13.61□□□□□ -0.23
USP39-207ENST00000450066 UBE3DQ7Z6J8 389 aa13.61□□□□□ -0.23
USP39-207ENST00000450066 SPATA24Q86W54 205 aa13.61□□□□□ -0.23
USP39-207ENST00000450066 NUDT13Q86X67 352 aa13.61□□□□□ -0.23
USP39-207ENST00000450066 GBP5Q96PP8 586 aa13.61□□□□□ -0.23
USP39-207ENST00000450066 BHLHE41Q9C0J9 482 aaPredicted RBP13.61□□□□□ -0.23
USP39-207ENST00000450066 DDX31Q9H8H2 851 aaKnown RBP13.61□□□□□ -0.23
USP39-207ENST00000450066 PRMT8Q9NR22 394 aaPredicted RBP13.61□□□□□ -0.23
USP39-207ENST00000450066 HRASLS2Q9NWW9 162 aa13.61□□□□□ -0.23
USP39-207ENST00000450066 ACTR3BQ9P1U1 418 aa13.61□□□□□ -0.23
USP39-207ENST00000450066 ANKMY1Q9P2S6 941 aa13.61□□□□□ -0.23
USP39-207ENST00000450066 BTNL2Q9UIR0 455 aa13.61□□□□□ -0.23
USP39-207ENST00000450066 DOLKQ9UPQ8 538 aa13.61□□□□□ -0.23
USP39-207ENST00000450066 H3BNX3 289 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 RTCAO00442 366 aaKnown RBP13.6□□□□□ -0.23
USP39-207ENST00000450066 B3GALT4O96024 378 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 C8BP07358 591 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 HTR1EP28566 365 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 FASLGP48023 281 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 MAPK12P53778 367 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 C21orf59P57076 290 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 MRPS22P82650 360 aaKnown RBP13.6□□□□□ -0.23
USP39-207ENST00000450066 RHDQ02161 417 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 CYP4F3Q08477 520 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 HYAL2Q12891 473 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 TJAP1Q5JTD0 557 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 SPESP1Q6UW49 350 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 IFNEQ86WN2 208 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 ZNF548Q8NEK5 533 aaPredicted RBP13.6□□□□□ -0.23
USP39-207ENST00000450066 EDAQ92838 391 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 MIEF2Q96C03 454 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 LRGUKQ96M69 825 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 CCDC115Q96NT0 180 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 PANX1Q96RD7 426 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 ECSITQ9BQ95 431 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 THUMPD3Q9BV44 507 aaKnown RBP13.6□□□□□ -0.23
USP39-207ENST00000450066 TRIM15Q9C019 465 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 SH3BP4Q9P0V3 963 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 SNRNP200O75643 2136 aaKnown RBP13.6□□□□□ -0.23
USP39-207ENST00000450066 LMO7DNF2Z398 122 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 RNASET2O00584 256 aaKnown RBP13.6□□□□□ -0.23
USP39-207ENST00000450066 AQP9O43315 295 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 ANP32DO95626 131 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 IL3P08700 152 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 TDGF1P13385 188 aa13.6□□□□□ -0.23
USP39-207ENST00000450066 MAGP20916 626 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms