RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 SLC3A1Q07837 685 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 PTPRCAPQ14761 206 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 DPYSL2Q16555 572 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 RBM48Q5RL73 367 aaKnown RBP12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 FUKQ8N0W3 1084 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 TOE1Q96GM8 510 aaKnown RBP12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 CCDC115Q96NT0 180 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 KCNC2Q96PR1 638 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 FEM1AQ9BSK4 669 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 COPS4Q9BT78 406 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 RNF225M0QZC1 329 aaPredicted RBP12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 KRT36O76013 467 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 FOLH1Q04609 750 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 DEFB134Q4QY38 66 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 ANKRD7Q92527 254 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 MSLNLQ96KJ4 702 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 CIB1Q99828 191 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 SMOQ99835 787 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 G6PC3Q9BUM1 346 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 MALT1Q9UDY8 824 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 SLC7A11Q9UPY5 501 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 CAMK2AQ9UQM7 478 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 PDCD4Q53EL6 469 aaKnown RBP12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 TTMPQ5BVD1 217 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 GOLGA7Q7Z5G4 137 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 LAS2Q8IYD9 372 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 C4orf32Q8N8J7 132 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 RLN3Q8WXF3 142 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 HSPA12BQ96MM6 686 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 TMEM248Q9NWD8 314 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 FLRT1Q9NZU1 646 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 NEURL4Q96JN8 1562 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 A0A1W2PRQ8 180 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 GGT3PA6NGU5 568 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 SCELO95171 688 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 DNASE1L3Q13609 305 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 Q6ZSR6 202 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 ADGRD2Q7Z7M1 963 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 NTAN1Q96AB6 310 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 PHF12Q96QT6 1004 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 SNTG1Q9NSN8 517 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 KDM4BO94953 1096 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 DHFRP00374 187 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 ZNF28P17035 718 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 EIF2S3P41091 472 aaKnown RBP12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 CDH15P55291 814 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 SLAMF1Q13291 335 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 E2F2Q14209 437 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 ELAVL3Q14576 367 aaKnown RBP12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 FBXO43Q4G163 708 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 ARL9Q6T311 187 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 ZER1Q7Z7L7 766 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 CHCHD6Q9BRQ6 235 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 POLDIP3Q9BY77 421 aaKnown RBP12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 HEBP1Q9NRV9 189 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 KCTD3Q9Y597 815 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 ATE1O95260 518 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 RLN2P04090 185 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 GRK5P34947 590 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 GDF10P55107 478 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 HERV-K104P61576 105 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 HERVK_113P63132 956 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 SF3B4Q15427 424 aaKnown RBP eCLIP12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 KLHL22Q53GT1 634 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 ARL14Q8N4G2 192 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 CNDP2Q96KP4 475 aaKnown RBP12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 ERVK-6Q9BXR3 956 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 HCFC1R1Q9NWW0 138 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 CNTN6Q9UQ52 1028 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 SIX3O95343 332 aaPredicted RBP12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 C6orf47O95873 294 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 C6P13671 934 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 MAGEA11P43364 429 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 TMEFF1Q8IYR6 380 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 KLHL36Q8N4N3 616 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 CCDC28BQ9BUN5 200 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 MEMO1Q9Y316 297 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 HOXB6P17509 224 aaKnown RBP12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 GPR153Q6NV75 609 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 OR9K2Q8NGE7 335 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 OR8S1Q8NH09 359 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 TM9SF4Q92544 642 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 TMA7Q9Y2S6 64 aaKnown RBP12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 SCGB2A1O75556 95 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 RCBTB2O95199 551 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 THRBP10828 461 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 DGKQP52824 942 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 HERC3Q15034 1050 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 CDK10Q15131 360 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 PTCHD3Q3KNS1 767 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 C3orf38Q5JPI3 329 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 LRRN4CLQ8ND94 238 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 CRB3Q9BUF7 120 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 PPP1R14DQ9NXH3 145 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 ANGPTL1O95841 491 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 MAD2L1BPQ15013 274 aaPredicted RBP12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 PGM2L1Q6PCE3 622 aa12.31□□□□□ -0.44
AC006001.3-201ENST00000449307 SPERTQ8NA61 448 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms