RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 HAAOP46952 286 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 GZMMP51124 257 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 TPI1P60174 286 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 CYP4F2P78329 520 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 ZNF169Q14929 603 aaPredicted RBP18.51■□□□□ 0.55
HMGA1-205ENST00000447654 SSX1Q16384 188 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 DUSP6Q16828 381 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 ASPGQ86U10 573 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 SERINC5Q86VE9 423 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 PGBD5Q8N414 524 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 HGDQ93099 445 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 RNF34Q969K3 372 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 PCED1BQ96HM7 432 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 NPY6RQ99463 290 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 EPYCQ99645 322 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 SMOQ99835 787 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 REEP1Q9H902 201 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 ABCB9Q9NP78 766 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 ZFP64Q9NPA5 681 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 PIGVQ9NUD9 493 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 GPR83Q9NYM4 423 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 CPNE7Q9UBL6 633 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 SAMHD1Q9Y3Z3 626 aaKnown RBP18.51■□□□□ 0.55
HMGA1-205ENST00000447654 TSC2P49815 1807 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 TRBV5-3A0A0A0MS03 114 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 INMT-MINDY4F8WBC2 141 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 QSOX1O00391 747 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 PSMA1P25786 263 aaKnown RBP18.51■□□□□ 0.55
HMGA1-205ENST00000447654 ITGA1P56199 1179 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 MAPKAPK3Q16644 382 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 PTCHD3Q3KNS1 767 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 SRFBP1Q8NEF9 429 aaKnown RBP18.51■□□□□ 0.55
HMGA1-205ENST00000447654 OR56A4Q8NGH8 313 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 OR6M1Q8NGM8 313 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 STAG3L4Q8TBR4 150 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 EXT2Q93063 718 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 UPRTQ96BW1 309 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 FAM120BQ96EK7 910 aaKnown RBP18.51■□□□□ 0.55
HMGA1-205ENST00000447654 FICDQ9BVA6 458 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 SIK2Q9H0K1 926 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 ELOVL6Q9H5J4 265 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 RC3H2Q9HBD1 1191 aaKnown RBP18.51■□□□□ 0.55
HMGA1-205ENST00000447654 SEMA4BQ9NPR2 832 aaPredicted RBP18.51■□□□□ 0.55
HMGA1-205ENST00000447654 RPS6KA6Q9UK32 745 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 ABCG2Q9UNQ0 655 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 BAIAP2Q9UQB8 552 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 BPTFQ12830 3046 aa18.5■□□□□ 0.55
HMGA1-205ENST00000447654 YJEFN3A6XGL0 299 aa18.5■□□□□ 0.55
HMGA1-205ENST00000447654 TP53P04637 393 aaPredicted RBP18.5■□□□□ 0.55
HMGA1-205ENST00000447654 IL6P05231 212 aa18.5■□□□□ 0.55
HMGA1-205ENST00000447654 HMBSP08397 361 aa18.5■□□□□ 0.55
HMGA1-205ENST00000447654 OR56A5P0C7T3 313 aa18.5■□□□□ 0.55
HMGA1-205ENST00000447654 GABRB1P18505 474 aa18.5■□□□□ 0.55
HMGA1-205ENST00000447654 ITGALP20701 1170 aa18.5■□□□□ 0.55
HMGA1-205ENST00000447654 OR4D1Q15615 310 aa18.5■□□□□ 0.55
HMGA1-205ENST00000447654 FAM171A1Q5VUB5 890 aa18.5■□□□□ 0.55
HMGA1-205ENST00000447654 RTL4Q6ZR62 310 aa18.5■□□□□ 0.55
HMGA1-205ENST00000447654 OR52K2Q8NGK3 314 aa18.5■□□□□ 0.55
HMGA1-205ENST00000447654 AP3S1Q92572 193 aa18.5■□□□□ 0.55
HMGA1-205ENST00000447654 RIT1Q92963 219 aa18.5■□□□□ 0.55
HMGA1-205ENST00000447654 KIAA1191Q96A73 305 aa18.5■□□□□ 0.55
HMGA1-205ENST00000447654 ULK4Q96C45 1275 aa18.5■□□□□ 0.55
HMGA1-205ENST00000447654 PABPC5Q96DU9 382 aaKnown RBP18.5■□□□□ 0.55
HMGA1-205ENST00000447654 WBP1Q96G27 269 aa18.5■□□□□ 0.55
HMGA1-205ENST00000447654 RTP3Q9BQQ7 232 aa18.5■□□□□ 0.55
HMGA1-205ENST00000447654 MED10Q9BTT4 135 aa18.5■□□□□ 0.55
HMGA1-205ENST00000447654 CD244Q9BZW8 370 aa18.5■□□□□ 0.55
HMGA1-205ENST00000447654 ENOPH1Q9UHY7 261 aa18.5■□□□□ 0.55
HMGA1-205ENST00000447654 KCNMB2Q9Y691 235 aa18.5■□□□□ 0.55
HMGA1-205ENST00000447654 HYKKA2RU49 373 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 LRRC14BA6NHZ5 514 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 FAM72CH0Y354 149 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 SGK494L7N484 410 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 WNT9AO14904 365 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 CHP2O43745 196 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 THP07101 528 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 ACSM4P0C7M7 580 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 ODC1P11926 461 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 CD52P31358 61 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 FLT3LGP49771 235 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 ABHD18Q0P651 414 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 FAM72AQ5TYM5 149 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 FAM72DQ6L9T8 149 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 Q6ZSR9 355 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 TRILQ7L0X0 811 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 FAM72BQ86X60 149 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 MSRB3Q8IXL7 192 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 SOSTQ9BQB4 213 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.49■□□□□ 0.55
HMGA1-205ENST00000447654 ULBP1Q9BZM6 244 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 MFSD1Q9H3U5 465 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 IKZF5Q9H5V7 419 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 SNTG1Q9NSN8 517 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 MYLKQ15746 1914 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 A0A1W2PPL8 197 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 MFSD2BA6NFX1 497 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 F8W810 466 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 M0QYT0 321 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 PER2O15055 1255 aa18.49■□□□□ 0.55
HMGA1-205ENST00000447654 SNAPC5O75971 98 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms