RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 PAGE2BQ5JRK9 111 aa16.13■□□□□ 0.17
LAPTM4B-201ENST00000445593 TBC1D3GQ6DHY5 549 aa16.13■□□□□ 0.17
LAPTM4B-201ENST00000445593 TBC1D3CQ6IPX1 549 aa16.13■□□□□ 0.17
LAPTM4B-201ENST00000445593 PDZD3Q86UT5 571 aa16.13■□□□□ 0.17
LAPTM4B-201ENST00000445593 TBC1D3Q8IZP1 549 aaPredicted RBP16.13■□□□□ 0.17
LAPTM4B-201ENST00000445593 DCUN1D5Q9BTE7 237 aa16.13■□□□□ 0.17
LAPTM4B-201ENST00000445593 RIBC2Q9H4K1 309 aa16.13■□□□□ 0.17
LAPTM4B-201ENST00000445593 MIEF1Q9NQG6 463 aa16.13■□□□□ 0.17
LAPTM4B-201ENST00000445593 ZFR2Q9UPR6 939 aaKnown RBP16.13■□□□□ 0.17
LAPTM4B-201ENST00000445593 WASHC1A8K0Z3 465 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 TMX2-CTNND1H3BSU7 103 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 HOXB9P17482 250 aaPredicted RBP16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 HYAL1Q12794 435 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 WASH2PQ6VEQ5 465 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 C17orf64Q86WR6 236 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 PPCDCQ96CD2 204 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 DHRS1Q96LJ7 313 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 EFCAB11Q9BUY7 163 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 TRMT61BQ9BVS5 477 aaKnown RBP16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 SGPP1Q9BX95 441 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 AMBRA1Q9C0C7 1298 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 POLR1BQ9H9Y6 1135 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 ITM2CQ9NQX7 267 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 FAM120CQ9NX05 1096 aaKnown RBP16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 BAG5Q9UL15 447 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 KDELR2P33947 212 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 PLA2G16P53816 162 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 FCHO2Q0JRZ9 810 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 SGCGQ13326 291 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 ADRM1Q16186 407 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 PATL1Q86TB9 770 aaKnown RBP16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 OR52J3Q8NH60 311 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 SPPL2AQ8TCT8 520 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 ZNF514Q96K75 400 aaPredicted RBP16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 PCDHB11Q9Y5F2 797 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 A0A1W2PQU0 124 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 PTGES3LE9PB15 166 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 VEGFDO43915 354 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 MAN1A2O60476 641 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 HOXB3P14651 431 aaPredicted RBP16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 AGXTP21549 392 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 CLDN2P57739 230 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 DYNC1I2Q13409 638 aaKnown RBP16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 ATAT1Q5SQI0 421 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 C6orf183Q5T699 404 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 DCUN1D3Q8IWE4 304 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 ADHFE1Q8IWW8 467 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 OR8J2Q8NGG1 315 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 C16orf78Q8WTQ4 265 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 BRF2Q9HAW0 419 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 IFT80Q9P2H3 777 aaPredicted RBP16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 CDC14AQ9UNH5 594 aa16.12■□□□□ 0.17
LAPTM4B-201ENST00000445593 RETP07949 1114 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 CHI3L1P36222 383 aaPredicted RBP16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 TRPC1P48995 793 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 DPY19L1Q2PZI1 675 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 ITPRIPL2Q3MIP1 535 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 CCDC92Q53HC0 331 aaPredicted RBP16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 VN1R5Q7Z5H4 357 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 ZC3H7AQ8IWR0 971 aaKnown RBP16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 LRRC56Q8IYG6 542 aaPredicted RBP16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 UCN3Q969E3 161 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 REPS1Q96D71 796 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 C11orf24Q96F05 449 aaPredicted RBP16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 OTUB1Q96FW1 271 aaPredicted RBP16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 SLC35A5Q9BS91 424 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 EPHX3Q9H6B9 360 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 RUBCNLQ9H714 662 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 CCDC88CQ9P219 2028 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 HEATR5BQ9P2D3 2071 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 ANKDD1BA6NHY2 528 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 PI15O43692 258 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 SH3BP5O60239 455 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 CCNDBP1O95273 360 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 ASMTP46597 345 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 CCNYL2Q5T2Q4 361 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 ZNF765Q7L2R6 523 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 HORMAD1Q86X24 394 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 SMYD1Q8NB12 490 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 MAGED4Q96JG8 741 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 HDAC8Q9BY41 377 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 CCDC90BQ9GZT6 254 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 RABL2BQ9UNT1 228 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 GPR34Q9UPC5 381 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 PCDHGA8Q9Y5G5 932 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 SNX11Q9Y5W9 270 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 CEPT1Q9Y6K0 416 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 LAMA1P25391 3075 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 PLXND1Q9Y4D7 1925 aa16.11■□□□□ 0.17
LAPTM4B-201ENST00000445593 H0Y8X5 98 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 OR1F1O43749 312 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 KELP23276 732 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 ADARB1P78563 741 aaKnown RBP16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 MPEG1Q2M385 716 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 RNF130Q86XS8 419 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 ZCCHC7Q8N3Z6 543 aaKnown RBP16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 ANKRD53Q8N9V6 530 aa16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 MAGEB10Q96LZ2 347 aaPredicted RBP16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 RBM38Q9H0Z9 239 aaKnown RBP16.1■□□□□ 0.17
LAPTM4B-201ENST00000445593 DPEP2Q9H4A9 486 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms