RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 RBM38Q9H0Z9 239 aaKnown RBP10.22□□□□□ -0.77
TOP3B-210ENST00000444502 SMURF2Q9HAU4 748 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 UGT2A1Q9Y4X1 527 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 TNFRSF21O75509 655 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 B3GALNT1O75752 331 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 SNAP29O95721 258 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 PRPS2P11908 318 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 CAPGP40121 348 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 SLC9A3P48764 834 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 PCBP2Q15366 365 aaKnown RBP eCLIP10.22□□□□□ -0.779e-7■■■■□ 23.4
TOP3B-210ENST00000444502 CXorf57Q6NSI4 855 aaKnown RBP10.22□□□□□ -0.77
TOP3B-210ENST00000444502 CYP4Z1Q86W10 505 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 KRT73Q86Y46 540 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 FUNDC1Q8IVP5 155 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 SLC22A15Q8IZD6 547 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 SLC38A6Q8IZM9 456 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 UBASH3BQ8TF42 649 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 TRUB1Q8WWH5 349 aaKnown RBP10.22□□□□□ -0.77
TOP3B-210ENST00000444502 CDCA3Q99618 268 aaPredicted RBP10.22□□□□□ -0.77
TOP3B-210ENST00000444502 CNPPD1Q9BV87 410 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 WDR12Q9GZL7 423 aaKnown RBP10.22□□□□□ -0.77
TOP3B-210ENST00000444502 CCM2LQ9NUG4 571 aaPredicted RBP10.22□□□□□ -0.77
TOP3B-210ENST00000444502 TARM1B6A8C7 271 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 KMOO15229 486 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 ERI3O43414 337 aaKnown RBP10.22□□□□□ -0.77
TOP3B-210ENST00000444502 SLC28A2O43868 658 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 NOS3P29474 1203 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 RYKP34925 604 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 ARRB1P49407 418 aaPredicted RBP10.22□□□□□ -0.77
TOP3B-210ENST00000444502 DEFA1P59665 94 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 DEFA3P59666 94 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 NFATC3Q12968 1075 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 MRPL58Q14197 206 aaKnown RBP10.22□□□□□ -0.77
TOP3B-210ENST00000444502 TYSND1Q2T9J0 566 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 AFMIDQ63HM1 303 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 POMZP3Q6PJE2 187 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 SPRED2Q7Z698 418 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 THOC6Q86W42 341 aaKnown RBP10.22□□□□□ -0.77
TOP3B-210ENST00000444502 ZDHHC21Q8IVQ6 265 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 CADM2Q8N3J6 435 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 SDR16C5Q8N3Y7 309 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 MINDY1Q8N5J2 469 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 C1orf52Q8N6N3 182 aaKnown RBP10.22□□□□□ -0.77
TOP3B-210ENST00000444502 OR9Q1Q8NGQ5 310 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 LKAAEAR1Q8TD35 194 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 SETD7Q8WTS6 366 aaKnown RBP10.22□□□□□ -0.77
TOP3B-210ENST00000444502 KRT84Q9NSB2 600 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 PDP1Q9P0J1 537 aaPredicted RBP10.22□□□□□ -0.77
TOP3B-210ENST00000444502 MAP10Q9P2G4 905 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 LHX3Q9UBR4 397 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 RPS6KA6Q9UK32 745 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 MAFFQ9ULX9 164 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 MRPS33Q9Y291 106 aaKnown RBP10.22□□□□□ -0.77
TOP3B-210ENST00000444502 CEP250Q9BV73 2442 aa10.22□□□□□ -0.77
TOP3B-210ENST00000444502 RLFQ13129 1914 aa10.21□□□□□ -0.77
TOP3B-210ENST00000444502 A0A1B0GTL3 188 aa10.21□□□□□ -0.77
TOP3B-210ENST00000444502 ZNF860A6NHJ4 632 aa10.21□□□□□ -0.77
TOP3B-210ENST00000444502 FAM170BA6NMN3 283 aa10.21□□□□□ -0.77
TOP3B-210ENST00000444502 PDYNP01213 254 aa10.21□□□□□ -0.77
TOP3B-210ENST00000444502 EBLN1P0CF75 366 aa10.21□□□□□ -0.77
TOP3B-210ENST00000444502 IL12AP29459 219 aa10.21□□□□□ -0.77
TOP3B-210ENST00000444502 OXTRP30559 389 aa10.21□□□□□ -0.77
TOP3B-210ENST00000444502 BORAQ6PGQ7 559 aa10.21□□□□□ -0.77
TOP3B-210ENST00000444502 PARM1Q6UWI2 310 aa10.21□□□□□ -0.77
TOP3B-210ENST00000444502 THAP5Q7Z6K1 395 aa10.21□□□□□ -0.77
TOP3B-210ENST00000444502 GLB1L3Q8NCI6 653 aaPredicted RBP10.21□□□□□ -0.77
TOP3B-210ENST00000444502 CTRCQ99895 268 aa10.21□□□□□ -0.77
TOP3B-210ENST00000444502 SLC17A9Q9BYT1 436 aa10.21□□□□□ -0.77
TOP3B-210ENST00000444502 MUC13Q9H3R2 512 aa10.21□□□□□ -0.77
TOP3B-210ENST00000444502 GTF2A1LQ9UNN4 478 aa10.21□□□□□ -0.77
TOP3B-210ENST00000444502 CA5BQ9Y2D0 317 aa10.21□□□□□ -0.77
TOP3B-210ENST00000444502 PSME4Q14997 1843 aa10.21□□□□□ -0.77
TOP3B-210ENST00000444502 CACNA1EQ15878 2313 aa10.21□□□□□ -0.77
TOP3B-210ENST00000444502 C12orf71A8MTZ7 269 aa10.21□□□□□ -0.78
TOP3B-210ENST00000444502 H3BUI4 141 aa10.21□□□□□ -0.78
TOP3B-210ENST00000444502 RSL1D1O76021 490 aaKnown RBP10.21□□□□□ -0.78
TOP3B-210ENST00000444502 TNFP01375 233 aa10.21□□□□□ -0.78
TOP3B-210ENST00000444502 BCKDHAP12694 445 aa10.21□□□□□ -0.78
TOP3B-210ENST00000444502 S100A5P33763 92 aa10.21□□□□□ -0.78
TOP3B-210ENST00000444502 ZNHIT3Q15649 155 aaPredicted RBP10.21□□□□□ -0.78
TOP3B-210ENST00000444502 USP53Q70EK8 1073 aa10.21□□□□□ -0.78
TOP3B-210ENST00000444502 PARS2Q7L3T8 475 aaKnown RBP10.21□□□□□ -0.78
TOP3B-210ENST00000444502 HSD11B1LQ7Z5J1 315 aa10.21□□□□□ -0.78
TOP3B-210ENST00000444502 R3HCC1LQ7Z5L2 792 aaKnown RBP10.21□□□□□ -0.78
TOP3B-210ENST00000444502 GALNT10Q86SR1 603 aa10.21□□□□□ -0.78
TOP3B-210ENST00000444502 GALNT12Q8IXK2 581 aa10.21□□□□□ -0.78
TOP3B-210ENST00000444502 ZNF540Q8NDQ6 660 aa10.21□□□□□ -0.78
TOP3B-210ENST00000444502 VANGL1Q8TAA9 524 aaPredicted RBP10.21□□□□□ -0.78
TOP3B-210ENST00000444502 LRRC20Q8TCA0 184 aa10.21□□□□□ -0.78
TOP3B-210ENST00000444502 MRPL38Q96DV4 380 aaKnown RBP10.21□□□□□ -0.78
TOP3B-210ENST00000444502 LRIG1Q96JA1 1093 aa10.21□□□□□ -0.78
TOP3B-210ENST00000444502 TTYH2Q9BSA4 534 aa10.21□□□□□ -0.78
TOP3B-210ENST00000444502 TUBB1Q9H4B7 451 aa10.21□□□□□ -0.78
TOP3B-210ENST00000444502 MYO10Q9HD67 2058 aa10.21□□□□□ -0.78
TOP3B-210ENST00000444502 GLOD5A6NK44 160 aa10.21□□□□□ -0.78
TOP3B-210ENST00000444502 NDUFS4O43181 175 aa10.21□□□□□ -0.78
TOP3B-210ENST00000444502 SUV39H1O43463 412 aa10.21□□□□□ -0.78
TOP3B-210ENST00000444502 SCELO95171 688 aa10.21□□□□□ -0.78
TOP3B-210ENST00000444502 OPN1SWP03999 348 aa10.21□□□□□ -0.78
TOP3B-210ENST00000444502 PGDP52209 483 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms