RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 CYC1P08574 325 aa17.26■□□□□ 0.35
SMPD4-210ENST00000441135 AVPR1BP47901 424 aa17.26■□□□□ 0.35
SMPD4-210ENST00000441135 GLRBP48167 497 aa17.26■□□□□ 0.35
SMPD4-210ENST00000441135 SKP1P63208 163 aa17.26■□□□□ 0.35
SMPD4-210ENST00000441135 MEF2AQ02078 507 aaPredicted RBP17.26■□□□□ 0.35
SMPD4-210ENST00000441135 RGS1Q08116 209 aa17.26■□□□□ 0.35
SMPD4-210ENST00000441135 LAPTM5Q13571 262 aa17.26■□□□□ 0.35
SMPD4-210ENST00000441135 PCBP2Q15366 365 aaKnown RBP eCLIP17.26■□□□□ 0.35
SMPD4-210ENST00000441135 TUBB8Q3ZCM7 444 aa17.26■□□□□ 0.35
SMPD4-210ENST00000441135 KIRREL2Q6UWL6 708 aa17.26■□□□□ 0.35
SMPD4-210ENST00000441135 IGFL3Q6UXB1 125 aa17.26■□□□□ 0.35
SMPD4-210ENST00000441135 SHISA6Q6ZSJ9 500 aa17.26■□□□□ 0.35
SMPD4-210ENST00000441135 AFAP1L2Q8N4X5 818 aa17.26■□□□□ 0.35
SMPD4-210ENST00000441135 GALNT11Q8NCW6 608 aa17.26■□□□□ 0.35
SMPD4-210ENST00000441135 ZNF740Q8NDX6 193 aa17.26■□□□□ 0.35
SMPD4-210ENST00000441135 UBLCP1Q8WVY7 318 aaPredicted RBP17.26■□□□□ 0.35
SMPD4-210ENST00000441135 EXT2Q93063 718 aa17.26■□□□□ 0.35
SMPD4-210ENST00000441135 PTCD3Q96EY7 689 aaKnown RBP17.26■□□□□ 0.35
SMPD4-210ENST00000441135 MRPL57Q9BQC6 102 aaKnown RBP17.26■□□□□ 0.35
SMPD4-210ENST00000441135 TGIF2Q9GZN2 237 aa17.26■□□□□ 0.35
SMPD4-210ENST00000441135 CLK4Q9HAZ1 481 aaKnown RBP17.26■□□□□ 0.35
SMPD4-210ENST00000441135 MKKSQ9NPJ1 570 aaPredicted RBP17.26■□□□□ 0.35
SMPD4-210ENST00000441135 OPTCQ9UBM4 332 aa17.26■□□□□ 0.35
SMPD4-210ENST00000441135 VPS4AQ9UN37 437 aa17.26■□□□□ 0.35
SMPD4-210ENST00000441135 LRRK2Q5S007 2527 aa17.25■□□□□ 0.35
SMPD4-210ENST00000441135 URADA6NGE7 173 aa17.25■□□□□ 0.35
SMPD4-210ENST00000441135 PCDH17O14917 1159 aa17.25■□□□□ 0.35
SMPD4-210ENST00000441135 NDUFS4O43181 175 aa17.25■□□□□ 0.35
SMPD4-210ENST00000441135 CCNT2O60583 730 aaKnown RBP17.25■□□□□ 0.35
SMPD4-210ENST00000441135 TUBBP07437 444 aa17.25■□□□□ 0.35
SMPD4-210ENST00000441135 SERPINA6P08185 405 aa17.25■□□□□ 0.35
SMPD4-210ENST00000441135 ZGLP1P0C6A0 271 aa17.25■□□□□ 0.35
SMPD4-210ENST00000441135 GFAPP14136 432 aa17.25■□□□□ 0.35
SMPD4-210ENST00000441135 ITGA3P26006 1051 aa17.25■□□□□ 0.35
SMPD4-210ENST00000441135 PIK3CGP48736 1102 aa17.25■□□□□ 0.35
SMPD4-210ENST00000441135 KLC1Q07866 573 aa17.25■□□□□ 0.35
SMPD4-210ENST00000441135 SLBPQ14493 270 aaKnown RBP eCLIP17.25■□□□□ 0.35
SMPD4-210ENST00000441135 HERC3Q15034 1050 aa17.25■□□□□ 0.35
SMPD4-210ENST00000441135 PAGE2BQ5JRK9 111 aa17.25■□□□□ 0.35
SMPD4-210ENST00000441135 TMIGD1Q6UXZ0 262 aa17.25■□□□□ 0.35
SMPD4-210ENST00000441135 AMER3Q8N944 861 aa17.25■□□□□ 0.35
SMPD4-210ENST00000441135 SNX31Q8N9S9 440 aa17.25■□□□□ 0.35
SMPD4-210ENST00000441135 ANKRD53Q8N9V6 530 aa17.25■□□□□ 0.35
SMPD4-210ENST00000441135 AENQ8WTP8 325 aaKnown RBP17.25■□□□□ 0.35
SMPD4-210ENST00000441135 MZB1Q8WU39 189 aa17.25■□□□□ 0.35
SMPD4-210ENST00000441135 MFRPQ9BY79 579 aa17.25■□□□□ 0.35
SMPD4-210ENST00000441135 SLC6A16Q9GZN6 736 aa17.25■□□□□ 0.35
SMPD4-210ENST00000441135 MRPL46Q9H2W6 279 aaKnown RBP17.25■□□□□ 0.35
SMPD4-210ENST00000441135 ZNF552Q9H707 407 aaPredicted RBP17.25■□□□□ 0.35
SMPD4-210ENST00000441135 TRPC4Q9UBN4 977 aa17.25■□□□□ 0.35
SMPD4-210ENST00000441135 C3orf18Q9UK00 162 aa17.25■□□□□ 0.35
SMPD4-210ENST00000441135 B3GNT3Q9Y2A9 372 aa17.25■□□□□ 0.35
SMPD4-210ENST00000441135 TNRC6AQ8NDV7 1962 aaKnown RBP17.25■□□□□ 0.35
SMPD4-210ENST00000441135 CLEC18AA5D8T8 446 aa17.24■□□□□ 0.35
SMPD4-210ENST00000441135 STX16-NPEPL1H3BU86 382 aa17.24■□□□□ 0.35
SMPD4-210ENST00000441135 STX16O14662 325 aa17.24■□□□□ 0.35
SMPD4-210ENST00000441135 GSTA1P08263 222 aa17.24■□□□□ 0.35
SMPD4-210ENST00000441135 NUDT17P0C025 328 aa17.24■□□□□ 0.35
SMPD4-210ENST00000441135 ACPPP15309 386 aa17.24■□□□□ 0.35
SMPD4-210ENST00000441135 EPORP19235 508 aa17.24■□□□□ 0.35
SMPD4-210ENST00000441135 HPDP32754 393 aaPredicted RBP17.24■□□□□ 0.35
SMPD4-210ENST00000441135 UBAP2LQ14157 1087 aaKnown RBP17.24■□□□□ 0.35
SMPD4-210ENST00000441135 INPP5JQ15735 1006 aaPredicted RBP17.24■□□□□ 0.35
SMPD4-210ENST00000441135 CLEC18BQ6UXF7 455 aa17.24■□□□□ 0.35
SMPD4-210ENST00000441135 Q8NA96 180 aa17.24■□□□□ 0.35
SMPD4-210ENST00000441135 KCT2Q8NC54 265 aa17.24■□□□□ 0.35
SMPD4-210ENST00000441135 CLEC18CQ8NCF0 446 aa17.24■□□□□ 0.35
SMPD4-210ENST00000441135 OR11G2Q8NGC1 345 aa17.24■□□□□ 0.35
SMPD4-210ENST00000441135 CREB3L4Q8TEY5 395 aa17.24■□□□□ 0.35
SMPD4-210ENST00000441135 CAVIN3Q969G5 261 aa17.24■□□□□ 0.35
SMPD4-210ENST00000441135 UBE2E3Q969T4 207 aa17.24■□□□□ 0.35
SMPD4-210ENST00000441135 ESAMQ96AP7 390 aa17.24■□□□□ 0.35
SMPD4-210ENST00000441135 MMABQ96EY8 250 aaPredicted RBP17.24■□□□□ 0.35
SMPD4-210ENST00000441135 ANKHQ9HCJ1 492 aa17.24■□□□□ 0.35
SMPD4-210ENST00000441135 LUZP4Q9P127 313 aa17.24■□□□□ 0.35
SMPD4-210ENST00000441135 XPR1Q9UBH6 696 aa17.24■□□□□ 0.35
SMPD4-210ENST00000441135 MRPS2Q9Y399 296 aaKnown RBP17.24■□□□□ 0.35
SMPD4-210ENST00000441135 ASB1Q9Y576 335 aa17.24■□□□□ 0.35
SMPD4-210ENST00000441135 PTPN13Q12923 2485 aa17.24■□□□□ 0.35
SMPD4-210ENST00000441135 CCDC88CQ9P219 2028 aa17.23■□□□□ 0.35
SMPD4-210ENST00000441135 A0A0A6YYC8 382 aaPredicted RBP17.23■□□□□ 0.35
SMPD4-210ENST00000441135 I3L1I5 382 aaPredicted RBP17.23■□□□□ 0.35
SMPD4-210ENST00000441135 UGDHO60701 494 aa17.23■□□□□ 0.35
SMPD4-210ENST00000441135 PRAMEF4O60810 478 aa17.23■□□□□ 0.35
SMPD4-210ENST00000441135 CDH16O75309 829 aa17.23■□□□□ 0.35
SMPD4-210ENST00000441135 CLEC3AO75596 197 aa17.23■□□□□ 0.35
SMPD4-210ENST00000441135 WFS1O76024 890 aa17.23■□□□□ 0.35
SMPD4-210ENST00000441135 HPP00738 406 aa17.23■□□□□ 0.35
SMPD4-210ENST00000441135 EPB42P16452 691 aa17.23■□□□□ 0.35
SMPD4-210ENST00000441135 IL10P22301 178 aa17.23■□□□□ 0.35
SMPD4-210ENST00000441135 SERPINB1P30740 379 aa17.23■□□□□ 0.35
SMPD4-210ENST00000441135 HSD17B3P37058 310 aa17.23■□□□□ 0.35
SMPD4-210ENST00000441135 AGTR2P50052 363 aa17.23■□□□□ 0.35
SMPD4-210ENST00000441135 IRF8Q02556 426 aa17.23■□□□□ 0.35
SMPD4-210ENST00000441135 DOC2AQ14183 400 aa17.23■□□□□ 0.35
SMPD4-210ENST00000441135 RBBP5Q15291 538 aaKnown RBP17.23■□□□□ 0.35
SMPD4-210ENST00000441135 PFKFB4Q16877 469 aa17.23■□□□□ 0.35
SMPD4-210ENST00000441135 FBXO48Q5FWF7 155 aa17.23■□□□□ 0.35
SMPD4-210ENST00000441135 XKR6Q5GH73 641 aa17.23■□□□□ 0.35
SMPD4-210ENST00000441135 PRAMEF9Q5VWM5 478 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms