RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 BARD1Q99728 777 aaKnown RBP15.26■□□□□ 0.03
DHFR-201ENST00000439211 IER2Q9BTL4 223 aa15.26■□□□□ 0.03
DHFR-201ENST00000439211 FAM126AQ9BYI3 521 aaPredicted RBP15.26■□□□□ 0.03
DHFR-201ENST00000439211 PFDN2Q9UHV9 154 aa15.26■□□□□ 0.03
DHFR-201ENST00000439211 TMEM5Q9Y2B1 443 aa15.26■□□□□ 0.03
DHFR-201ENST00000439211 INMT-MINDY4F8WBC2 141 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 CPSF4O95639 269 aaKnown RBP15.25■□□□□ 0.03
DHFR-201ENST00000439211 MMP2P08253 660 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 RYKP34925 604 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 UGT2B10P36537 528 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 HAAOP46952 286 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 MGAT3Q09327 533 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 GRK1Q15835 563 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 KCNA10Q16322 511 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 RUNDC3AQ59EK9 446 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 FAM209BQ5JX69 171 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 C6orf132Q5T0Z8 1188 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 ATXN7L2Q5T6C5 722 aaPredicted RBP15.25■□□□□ 0.03
DHFR-201ENST00000439211 ZNF600Q6ZNG1 722 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 CYP4Z1Q86W10 505 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 SLC13A3Q8WWT9 602 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 KLHL6Q8WZ60 621 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 PPP3R2Q96LZ3 170 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 NUSAP1Q9BXS6 441 aaKnown RBP15.25■□□□□ 0.03
DHFR-201ENST00000439211 KLHL21Q9UJP4 597 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 ZNF490Q9ULM2 529 aaPredicted RBP15.25■□□□□ 0.03
DHFR-201ENST00000439211 MAB21L2Q9Y586 359 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 B4DXG7 233 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 BET1O15155 118 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 FABP7O15540 132 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 APOL3O95236 402 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 MATN4O95460 622 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 SLC2A2P11168 524 aaPredicted RBP15.25■□□□□ 0.03
DHFR-201ENST00000439211 RPL17P18621 184 aaKnown RBP15.25■□□□□ 0.03
DHFR-201ENST00000439211 S100A3P33764 101 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 RGRP47804 291 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 RORCP51449 518 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 FADDQ13158 208 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 RCAN2Q14206 197 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 ZSWIM7Q19AV6 140 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 CYHR1Q6ZMK1 362 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 SPRTNQ9H040 489 aaPredicted RBP15.25■□□□□ 0.03
DHFR-201ENST00000439211 COPS3Q9UNS2 423 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 PCDHA9Q9Y5H5 950 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 ZNF646O15015 1829 aaPredicted RBP15.25■□□□□ 0.03
DHFR-201ENST00000439211 SIP14410 1827 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 ELOVL7A1L3X0 281 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 SLC25A14O95258 325 aaPredicted RBP15.25■□□□□ 0.03
DHFR-201ENST00000439211 ALPIP09923 528 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 HIST1H2AGP0C0S8 130 aaPredicted RBP15.25■□□□□ 0.03
DHFR-201ENST00000439211 HIST1H2ADP20671 130 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 CSTF2P33240 577 aaKnown RBP eCLIP15.25■□□□□ 0.03
DHFR-201ENST00000439211 ERVPABLB-1P60509 514 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 TAF1AQ15573 450 aaPredicted RBP15.25■□□□□ 0.03
DHFR-201ENST00000439211 LIX1Q8N485 282 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 SELENOMQ8WWX9 145 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 HIST1H2AHQ96KK5 128 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 HIST1H2AJQ99878 128 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 H2AFJQ9BTM1 129 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 PCTPQ9UKL6 214 aa15.25■□□□□ 0.03
DHFR-201ENST00000439211 PPIEQ9UNP9 301 aaKnown RBP15.25■□□□□ 0.03
DHFR-201ENST00000439211 LOC285095A0A1B0GVY8 99 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 ARVCFO00192 962 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 TOXO94900 526 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 IGLV3-25P01717 112 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 STSP08842 583 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 SWI5Q1ZZU3 235 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 RFTN2Q52LD8 501 aaPredicted RBP15.24■□□□□ 0.03
DHFR-201ENST00000439211 SPANXN4Q5MJ08 99 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 LETMD1Q6P1Q0 360 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 ZDHHC21Q8IVQ6 265 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 TAGAPQ8N103 731 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 TTYH1Q9H313 450 aaPredicted RBP15.24■□□□□ 0.03
DHFR-201ENST00000439211 ARL15Q9NXU5 204 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 TNFRSF10BO14763 440 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 RAB3AP20336 220 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 TRIM23P36406 574 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 MAPKAPK2P49137 400 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 POLR2GP62487 172 aaKnown RBP eCLIP15.24■□□□□ 0.03
DHFR-201ENST00000439211 IL18Q14116 193 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 UGT8Q16880 541 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 AAK1Q2M2I8 961 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 LAX1Q8IWV1 398 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 FAM86B1Q8N7N1 296 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 WDR36Q8NI36 951 aaKnown RBP15.24■□□□□ 0.03
DHFR-201ENST00000439211 FCF1Q9Y324 198 aaKnown RBP15.24■□□□□ 0.03
DHFR-201ENST00000439211 TNS1Q9HBL0 1735 aaKnown RBP15.24■□□□□ 0.03
DHFR-201ENST00000439211 OR2A25A4D2G3 310 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 ANKRD66B4E2M5 251 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 TEX46H3BTG2 121 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 M0QZQ0 153 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 GNB5O14775 395 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 FFAR2O15552 330 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 NPPAP01160 153 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 HOXC13P31276 330 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 COX10Q12887 443 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 DCLRE1CQ96SD1 692 aaKnown RBP15.24■□□□□ 0.03
DHFR-201ENST00000439211 DUSP21Q9H596 190 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 ZIM2Q9NZV7 527 aa15.24■□□□□ 0.03
DHFR-201ENST00000439211 TMCC3Q9ULS5 477 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms