RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 ACSM2AQ08AH3 577 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 ACSM2BQ68CK6 577 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 SLC16A12Q6ZSM3 486 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 DNAJB8Q8NHS0 232 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 ZFP90Q8TF47 636 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 GLMNQ92990 594 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 PKP4Q99569 1192 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 OSBPL10Q9BXB5 764 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 ALOXE3Q9BYJ1 711 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 AMBRA1Q9C0C7 1298 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 SLC5A10A0PJK1 596 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 CLIC1O00299 241 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 YY2O15391 372 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 LILRB5O75023 590 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 JRKO75564 520 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 INMTO95050 263 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 EGFP01133 1207 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 CATP04040 527 aaKnown RBP13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 PCCBP05166 539 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 LAMP1P11279 417 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 CRHBPP24387 322 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 DCTP40126 519 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 ABHD18Q0P651 414 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 CARTPTQ16568 116 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 BCL7AQ4VC05 210 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 TMEM196Q5HYL7 178 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 BROXQ5VW32 411 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 ZNF776Q68DI1 518 aaPredicted RBP13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 CRTC3Q6UUV7 619 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 ADHFE1Q8IWW8 467 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 EID3Q8N140 333 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 SH3KBP1Q96B97 665 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 PYURFQ96I23 114 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 MBOAT4Q96T53 435 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 TUBA1CQ9BQE3 449 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 MKRN2Q9H000 416 aaKnown RBP13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 SLC6A17Q9H1V8 727 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 EPHX3Q9H6B9 360 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 TRIM39Q9HCM9 518 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 FAM118AQ9NWS6 357 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 GULP1Q9UBP9 304 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 AASSQ9UDR5 926 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 BTBD3Q9Y2F9 522 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 COL4A2P08572 1712 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 EVPLLA8MZ36 301 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 PTGES3LE9PB15 166 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 ABCB7O75027 752 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 NTSR1P30989 418 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 WNT3P56703 355 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 RPS3AP61247 264 aaKnown RBP13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 CSTF3Q12996 717 aaKnown RBP13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 KCNAB2Q13303 367 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 GTF2H3Q13889 308 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 DUOXA1Q1HG43 343 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 CTU2Q2VPK5 515 aaKnown RBP13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 TMPRSS11BQ86T26 416 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 RASGRP3Q8IV61 690 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 C8orf59Q8N0T1 100 aaPredicted RBP13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 ZCCHC7Q8N3Z6 543 aaKnown RBP13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 C1orf52Q8N6N3 182 aaKnown RBP13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 RAB2BQ8WUD1 216 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 CCDC138Q96M89 665 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 HHIPQ96QV1 700 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 GPN2Q9H9Y4 310 aaPredicted RBP13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 AASDHPPTQ9NRN7 309 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 VNN3Q9NY84 501 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 AP3M1Q9Y2T2 418 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 PIAS3Q9Y6X2 628 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 PCM1Q15154 2024 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 NUMA1Q14980 2115 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 TRIOBPQ9H2D6 2365 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 C2CD4DB7Z1M9 353 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 DIRAS1O95057 198 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 EPN2O95208 641 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 ZNF8P17098 575 aaPredicted RBP13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 MTAPQ13126 283 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 HKDC1Q2TB90 917 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 INAVAQ3KP66 663 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 ZNF658BQ4V348 819 aaPredicted RBP13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 THAP5Q7Z6K1 395 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 HEATR4Q86WZ0 1026 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 ZNF547Q8IVP9 402 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 ZDHHC21Q8IVQ6 265 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 IL17RCQ8NAC3 791 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 OR52E4Q8NGH9 312 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 GANCQ8TET4 914 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 NEIL2Q969S2 332 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 RBM4BQ9BQ04 359 aaKnown RBP13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 RBM4Q9BWF3 364 aaKnown RBP13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 PRO3102Q9H379 93 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 PALMDQ9NP74 551 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 SPATA6Q9NWH7 488 aaPredicted RBP13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 ABCG2Q9UNQ0 655 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 TMEM98Q9Y2Y6 226 aa13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 GPC6Q9Y625 555 aaPredicted RBP13.34□□□□□ -0.27
PTCHD3-201ENST00000438700 H3BM21 787 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 hCG_2039718K7EN88 272 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 UGDHO60701 494 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 SCN2BO60939 215 aa13.33□□□□□ -0.28
PTCHD3-201ENST00000438700 CNOT3O75175 753 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms