RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 KRTAP10-9P60411 292 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 YWHAHQ04917 246 aaPredicted RBP3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 DRP2Q13474 957 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 TMEM132DQ14C87 1099 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 MORF4L2Q15014 288 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 C2orf76Q3KRA6 126 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 ANKRD20A4Q4UJ75 823 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 LBHQ53QV2 105 aaPredicted RBP3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 ANKRD20A8PQ5CZ79 823 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 ZRANB3Q5FWF4 1079 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 ANKRD20A2Q5SQ80 823 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 ANKRD20A1Q5TYW2 823 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 ANKRD20A3Q5VUR7 823 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 FAM46CQ5VWP2 391 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 BTNL8Q6UX41 500 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 ZER1Q7Z7L7 766 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 CROCCP3Q8IVE0 287 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 CCDC170Q8IYT3 715 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 CCDC185Q8N715 623 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 TCEANCQ8N8B7 351 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 LRTM2Q8N967 370 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 CKAP2Q8WWK9 683 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 ZNF486Q96H40 463 aaPredicted RBP3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 SUDS3Q9H7L9 328 aaPredicted RBP3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 B3GAT2Q9NPZ5 323 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 TMEM181Q9P2C4 612 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 LNPEPQ9UIQ6 1025 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 GMEB2Q9UKD1 530 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 PILRBQ9UKJ0 227 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 RABL2BQ9UNT1 228 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 KLK4Q9Y5K2 254 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 IKBKGQ9Y6K9 419 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 PRSS21Q9Y6M0 314 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 CSNK1G3Q9Y6M4 447 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 COLEC10Q9Y6Z7 277 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 ZCCHC6Q5VYS8 1495 aaKnown RBP3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 MYH15Q9Y2K3 1946 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 EIF4G1Q04637 1599 aaKnown RBP3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 LOC105371242A0A075B767 164 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 A0A1W2PR80 420 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 NDUFAF8A1L188 74 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 CCDC69A6NI79 296 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 RTCAO00442 366 aaKnown RBP3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 NDC80O14777 642 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 SURF4O15260 269 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 DCXO43602 365 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 KIF5CO60282 957 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 GOSR1O95249 250 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 CGAP01215 116 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 SERPINB2P05120 415 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 ANKRD34CP0C6C1 535 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 SP9P0CG40 484 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 LBPP18428 481 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 PIK3R1P27986 724 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 HPDP32754 393 aaPredicted RBP3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 MMP12P39900 470 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 ABRQ12979 859 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 DUSP5Q16690 384 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 MEP1BQ16820 701 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 FASTKD1Q53R41 847 aaKnown RBP3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 ZNF789Q5FWF6 425 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 ATP1A1-AS1Q5TC04 95 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 TATDN1Q6P1N9 297 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 ABRAXAS1Q6UWZ7 409 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 LINC00696Q6ZRV3 163 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 PIGWQ7Z7B1 504 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 LRRTM1Q86UE6 522 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 HOOK3Q86VS8 718 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 ANKRD20A12PQ8NF67 263 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 ATP6V0A1Q93050 837 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 SNX21Q969T3 373 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 NXPE2Q96DL1 559 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 OMA1Q96E52 524 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 RBM41Q96IZ5 413 aaKnown RBP3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 NSMCE3Q96MG7 304 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 AGAP3Q96P47 875 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 ZNF300Q96RE9 604 aaPredicted RBP3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 C17orf62Q9BQA9 187 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 ATG101Q9BSB4 218 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 ALKBH7Q9BT30 221 aaPredicted RBP3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 TMEM206Q9H813 350 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 TUFT1Q9NNX1 390 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 TMEM161AQ9NX61 479 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 POLKQ9UBT6 870 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 HOOK1Q9UJC3 728 aaKnown RBP3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 FBXL5Q9UKA1 691 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 ITM2BQ9Y287 266 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 MTF2Q9Y483 593 aaPredicted RBP3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 ANGPTL3Q9Y5C1 460 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 RNF215Q9Y6U7 377 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 SPATA31D1Q6ZQQ2 1576 aa3.25□□□□□ -1.89
LSM1P1-201ENST00000438629 IGKV3D-15A0A087WSY6 115 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 MPTX1A8MV57 137 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 VGLL3A8MV65 326 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 TCP10L2B9ZVM9 353 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 DDX39AO00148 427 aaKnown RBP3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 CCL24O00175 119 aa3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 SLC33A1O00400 549 aaPredicted RBP3.24□□□□□ -1.89
LSM1P1-201ENST00000438629 MPHOSPH10O00566 681 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms