RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 CYP4V2Q6ZWL3 525 aaPredicted RBP10.13□□□□□ -0.79
RTN4-211ENST00000438462 GPSM1Q86YR5 675 aa10.13□□□□□ -0.79
RTN4-211ENST00000438462 CYP4X1Q8N118 509 aa10.13□□□□□ -0.79
RTN4-211ENST00000438462 PLPP5Q8NEB5 264 aa10.13□□□□□ -0.79
RTN4-211ENST00000438462 RAB3IL1Q8TBN0 382 aa10.13□□□□□ -0.79
RTN4-211ENST00000438462 ZNF398Q8TD17 642 aa10.13□□□□□ -0.79
RTN4-211ENST00000438462 LRRN4Q8WUT4 740 aa10.13□□□□□ -0.79
RTN4-211ENST00000438462 HTRA1Q92743 480 aa10.13□□□□□ -0.79
RTN4-211ENST00000438462 NEUROG1Q92886 237 aa10.13□□□□□ -0.79
RTN4-211ENST00000438462 CAVIN3Q969G5 261 aa10.13□□□□□ -0.79
RTN4-211ENST00000438462 C3orf49Q96BT1 292 aa10.13□□□□□ -0.79
RTN4-211ENST00000438462 ZFP3Q96NJ6 502 aa10.13□□□□□ -0.79
RTN4-211ENST00000438462 SRPK1Q96SB4 655 aaKnown RBP10.13□□□□□ -0.79
RTN4-211ENST00000438462 TRAF4Q9BUZ4 470 aaPredicted RBP10.13□□□□□ -0.79
RTN4-211ENST00000438462 ALG2Q9H553 416 aa10.13□□□□□ -0.79
RTN4-211ENST00000438462 FN3KRPQ9HA64 309 aa10.13□□□□□ -0.79
RTN4-211ENST00000438462 ACKR4Q9NPB9 350 aa10.13□□□□□ -0.79
RTN4-211ENST00000438462 SACM1LQ9NTJ5 587 aa10.13□□□□□ -0.79
RTN4-211ENST00000438462 KLK4Q9Y5K2 254 aa10.13□□□□□ -0.79
RTN4-211ENST00000438462 MED12LQ86YW9 2145 aa10.12□□□□□ -0.79
RTN4-211ENST00000438462 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.12□□□□□ -0.79
RTN4-211ENST00000438462 ANKRD62A6NC57 917 aa10.12□□□□□ -0.79
RTN4-211ENST00000438462 FRG2CA6NGY1 282 aa10.12□□□□□ -0.79
RTN4-211ENST00000438462 SIGLEC16A6NMB1 481 aa10.12□□□□□ -0.79
RTN4-211ENST00000438462 H0YIG0 161 aa10.12□□□□□ -0.79
RTN4-211ENST00000438462 C16orf97H3BN30 126 aa10.12□□□□□ -0.79
RTN4-211ENST00000438462 P2RX6O15547 441 aa10.12□□□□□ -0.79
RTN4-211ENST00000438462 ZNF354AO60765 605 aaPredicted RBP10.12□□□□□ -0.79
RTN4-211ENST00000438462 TNFSF13O75888 250 aa10.12□□□□□ -0.79
RTN4-211ENST00000438462 OR2J2O76002 312 aa10.12□□□□□ -0.79
RTN4-211ENST00000438462 RCBTB2O95199 551 aa10.12□□□□□ -0.79
RTN4-211ENST00000438462 FTCDO95954 541 aa10.12□□□□□ -0.79
RTN4-211ENST00000438462 PRB2P02812 416 aaPredicted RBP10.12□□□□□ -0.79
RTN4-211ENST00000438462 RALBP11234 206 aa10.12□□□□□ -0.79
RTN4-211ENST00000438462 ME1P48163 572 aa10.12□□□□□ -0.79
RTN4-211ENST00000438462 ZNF135P52742 658 aaPredicted RBP10.12□□□□□ -0.79
RTN4-211ENST00000438462 COL10A1Q03692 680 aa10.12□□□□□ -0.79
RTN4-211ENST00000438462 PCDH1Q08174 1060 aa10.12□□□□□ -0.79
RTN4-211ENST00000438462 FAM53BQ14153 422 aa10.12□□□□□ -0.79
RTN4-211ENST00000438462 NOMO1Q15155 1222 aa10.12□□□□□ -0.79
RTN4-211ENST00000438462 PGGHGQ32M88 737 aa10.12□□□□□ -0.79
RTN4-211ENST00000438462 ZNF474Q6S9Z5 364 aaPredicted RBP10.12□□□□□ -0.79
RTN4-211ENST00000438462 RTL4Q6ZR62 310 aa10.12□□□□□ -0.79
RTN4-211ENST00000438462 SYDE1Q6ZW31 735 aaPredicted RBP10.12□□□□□ -0.79
RTN4-211ENST00000438462 APCDD1LQ8NCL9 501 aa10.12□□□□□ -0.79
RTN4-211ENST00000438462 NFAM1Q8NET5 270 aaPredicted RBP10.12□□□□□ -0.79
RTN4-211ENST00000438462 OR2L8Q8NGY9 312 aa10.12□□□□□ -0.79
RTN4-211ENST00000438462 ZCCHC10Q8TBK6 192 aa10.12□□□□□ -0.79
RTN4-211ENST00000438462 SOX7Q9BT81 388 aa10.12□□□□□ -0.79
RTN4-211ENST00000438462 NTMT1Q9BV86 223 aa10.12□□□□□ -0.79
RTN4-211ENST00000438462 VPS37BQ9H9H4 285 aa10.12□□□□□ -0.79
RTN4-211ENST00000438462 LIN28AQ9H9Z2 209 aaKnown RBP10.12□□□□□ -0.79
RTN4-211ENST00000438462 B3GALT5Q9Y2C3 310 aa10.12□□□□□ -0.79
RTN4-211ENST00000438462 YARS2Q9Y2Z4 477 aaKnown RBP10.12□□□□□ -0.79
RTN4-211ENST00000438462 ALPK2Q86TB3 2170 aa10.11□□□□□ -0.79
RTN4-211ENST00000438462 OR2A25A4D2G3 310 aa10.11□□□□□ -0.79
RTN4-211ENST00000438462 PES1O00541 588 aaKnown RBP10.11□□□□□ -0.79
RTN4-211ENST00000438462 SMAD9O15198 467 aaKnown RBP10.11□□□□□ -0.79
RTN4-211ENST00000438462 MFSD11O43934 449 aa10.11□□□□□ -0.79
RTN4-211ENST00000438462 VPS26AO75436 327 aa10.11□□□□□ -0.79
RTN4-211ENST00000438462 FKBP9O95302 570 aa10.11□□□□□ -0.79
RTN4-211ENST00000438462 CD8AP01732 235 aa10.11□□□□□ -0.79
RTN4-211ENST00000438462 HKR1P10072 659 aa10.11□□□□□ -0.79
RTN4-211ENST00000438462 CCL3P10147 92 aa10.11□□□□□ -0.79
RTN4-211ENST00000438462 ATP1B2P14415 290 aaPredicted RBP10.11□□□□□ -0.79
RTN4-211ENST00000438462 PFKFB1P16118 471 aa10.11□□□□□ -0.79
RTN4-211ENST00000438462 DESP17661 470 aa10.11□□□□□ -0.79
RTN4-211ENST00000438462 CLCN2P51788 898 aa10.11□□□□□ -0.79
RTN4-211ENST00000438462 RCAN2Q14206 197 aa10.11□□□□□ -0.79
RTN4-211ENST00000438462 BRD3Q15059 726 aa10.11□□□□□ -0.79
RTN4-211ENST00000438462 XKR6Q5GH73 641 aa10.11□□□□□ -0.79
RTN4-211ENST00000438462 DCST1Q5T197 706 aa10.11□□□□□ -0.79
RTN4-211ENST00000438462 FAM182AQ5T1J6 154 aa10.11□□□□□ -0.79
RTN4-211ENST00000438462 DNAJC24Q6P3W2 148 aa10.11□□□□□ -0.79
RTN4-211ENST00000438462 SUSD1Q6UWL2 747 aa10.11□□□□□ -0.79
RTN4-211ENST00000438462 DEF8Q6ZN54 512 aa10.11□□□□□ -0.79
RTN4-211ENST00000438462 PCGF5Q86SE9 256 aa10.11□□□□□ -0.79
RTN4-211ENST00000438462 OR2L3Q8NG85 312 aa10.11□□□□□ -0.79
RTN4-211ENST00000438462 FBF1Q8TES7 1133 aa10.11□□□□□ -0.79
RTN4-211ENST00000438462 ASB11Q8WXH4 323 aa10.11□□□□□ -0.79
RTN4-211ENST00000438462 C11orf24Q96F05 449 aaPredicted RBP10.11□□□□□ -0.79
RTN4-211ENST00000438462 TEKT5Q96M29 485 aa10.11□□□□□ -0.79
RTN4-211ENST00000438462 ACBD3Q9H3P7 528 aa10.11□□□□□ -0.79
RTN4-211ENST00000438462 SIX2Q9NPC8 291 aa10.11□□□□□ -0.79
RTN4-211ENST00000438462 LANCL2Q9NS86 450 aa10.11□□□□□ -0.79
RTN4-211ENST00000438462 ZNF223Q9UK11 482 aaPredicted RBP10.11□□□□□ -0.79
RTN4-211ENST00000438462 COL7A1Q02388 2944 aa10.1□□□□□ -0.79
RTN4-211ENST00000438462 A0A1B0GVL5 298 aa10.1□□□□□ -0.79
RTN4-211ENST00000438462 LRRD1A4D1F6 860 aa10.1□□□□□ -0.79
RTN4-211ENST00000438462 PABPN1LA6NDY0 278 aaKnown RBP10.1□□□□□ -0.79
RTN4-211ENST00000438462 LRRC3CA6NJW4 275 aa10.1□□□□□ -0.79
RTN4-211ENST00000438462 CLOCKO15516 846 aa10.1□□□□□ -0.79
RTN4-211ENST00000438462 PRKNO60260 465 aaPredicted RBP10.1□□□□□ -0.79
RTN4-211ENST00000438462 NSA2O95478 260 aaKnown RBP10.1□□□□□ -0.79
RTN4-211ENST00000438462 P04436 131 aa10.1□□□□□ -0.79
RTN4-211ENST00000438462 PIGAP37287 484 aa10.1□□□□□ -0.79
RTN4-211ENST00000438462 KCNJ5P48544 419 aa10.1□□□□□ -0.79
RTN4-211ENST00000438462 IRX1P78414 480 aaPredicted RBP10.1□□□□□ -0.79
RTN4-211ENST00000438462 HYAL2Q12891 473 aa10.1□□□□□ -0.79
RTN4-211ENST00000438462 CCBE1Q6UXH8 406 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms