RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 WDR20Q8TBZ3 569 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 HPS1Q92902 700 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 ITPAQ9BY32 194 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 MIR1-1HGQ9H1L0 117 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 NDRG4Q9ULP0 352 aaKnown RBP16.09■□□□□ 0.17
TTC3-209ENST00000438055 ASF1AQ9Y294 204 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 NINQ8N4C6 2090 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 QSOX1O00391 747 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 PLK4O00444 970 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 STSP08842 583 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 BMP4P12644 408 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 TIMP2P16035 220 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 PORP16435 677 aaPredicted RBP16.09■□□□□ 0.17
TTC3-209ENST00000438055 IL1RNP18510 177 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 IDSP22304 550 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 NTHL1P78549 312 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 VEZF1Q14119 521 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 TNFAIP8L2Q6P589 184 aaPredicted RBP16.09■□□□□ 0.17
TTC3-209ENST00000438055 TRIM40Q6P9F5 258 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 RNF165Q6ZSG1 346 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 PRSS48Q7RTY5 328 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 PLPP6Q8IY26 295 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 SORBS1Q9BX66 1292 aaKnown RBP16.09■□□□□ 0.17
TTC3-209ENST00000438055 ALOXE3Q9BYJ1 711 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 RERGLQ9H628 205 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 NECTIN3Q9NQS3 549 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 SPHK2Q9NRA0 654 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 RLIMQ9NVW2 624 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 RNF6Q9Y252 685 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 KRBA1A5PL33 1030 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 ANKDD1BA6NHY2 528 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 TBX1O43435 398 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 RPS26P62854 115 aaKnown RBP16.09■□□□□ 0.17
TTC3-209ENST00000438055 ZNF763Q0D2J5 394 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 UTS2BQ765I0 119 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 CLIP4Q8N3C7 705 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 TRAM1L1Q8N609 369 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 ZNF296Q8WUU4 475 aaPredicted RBP16.09■□□□□ 0.17
TTC3-209ENST00000438055 IPCEF1Q8WWN9 437 aaPredicted RBP16.09■□□□□ 0.17
TTC3-209ENST00000438055 SAMD11Q96NU1 681 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 VPS35Q96QK1 796 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 IL36AQ9UHA7 158 aa16.09■□□□□ 0.17
TTC3-209ENST00000438055 CFAP20Q9Y6A4 193 aaKnown RBP16.09■□□□□ 0.17
TTC3-209ENST00000438055 GFRA2O00451 464 aa16.08■□□□□ 0.17
TTC3-209ENST00000438055 CNOT3O75175 753 aaKnown RBP16.08■□□□□ 0.17
TTC3-209ENST00000438055 CSF2RAP15509 400 aa16.08■□□□□ 0.17
TTC3-209ENST00000438055 RAB15P59190 212 aa16.08■□□□□ 0.17
TTC3-209ENST00000438055 CDK6Q00534 326 aa16.08■□□□□ 0.17
TTC3-209ENST00000438055 ZNF385BQ569K4 471 aa16.08■□□□□ 0.17
TTC3-209ENST00000438055 C11orf74Q86VG3 221 aa16.08■□□□□ 0.17
TTC3-209ENST00000438055 ZNF740Q8NDX6 193 aa16.08■□□□□ 0.17
TTC3-209ENST00000438055 WDR48Q8TAF3 677 aa16.08■□□□□ 0.17
TTC3-209ENST00000438055 ZNF480Q8WV37 535 aa16.08■□□□□ 0.17
TTC3-209ENST00000438055 GBF1Q92538 1859 aa16.08■□□□□ 0.17
TTC3-209ENST00000438055 REEP4Q9H6H4 257 aa16.08■□□□□ 0.17
TTC3-209ENST00000438055 TMEM165Q9HC07 324 aa16.08■□□□□ 0.17
TTC3-209ENST00000438055 SPATA6Q9NWH7 488 aaPredicted RBP16.08■□□□□ 0.17
TTC3-209ENST00000438055 HSPE1-MOB4S4R3N1 261 aa16.08■□□□□ 0.17
TTC3-209ENST00000438055 SULT1C4O75897 302 aa16.08■□□□□ 0.16
TTC3-209ENST00000438055 AP2A2O94973 939 aa16.08■□□□□ 0.16
TTC3-209ENST00000438055 HLA-EP13747 358 aa16.08■□□□□ 0.16
TTC3-209ENST00000438055 ALOX12P18054 663 aa16.08■□□□□ 0.16
TTC3-209ENST00000438055 MVKQ03426 396 aa16.08■□□□□ 0.16
TTC3-209ENST00000438055 KCNC3Q14003 757 aa16.08■□□□□ 0.16
TTC3-209ENST00000438055 NLGN4XQ8N0W4 816 aa16.08■□□□□ 0.16
TTC3-209ENST00000438055 POC5Q8NA72 575 aa16.08■□□□□ 0.16
TTC3-209ENST00000438055 ALPK1Q96QP1 1244 aa16.08■□□□□ 0.16
TTC3-209ENST00000438055 SGTAO43765 313 aa16.08■□□□□ 0.16
TTC3-209ENST00000438055 SLCO2B1O94956 709 aa16.08■□□□□ 0.16
TTC3-209ENST00000438055 CXCL10P02778 98 aa16.08■□□□□ 0.16
TTC3-209ENST00000438055 GADD45AP24522 165 aa16.08■□□□□ 0.16
TTC3-209ENST00000438055 PPM1AP35813 382 aa16.08■□□□□ 0.16
TTC3-209ENST00000438055 RXRGP48443 463 aa16.08■□□□□ 0.16
TTC3-209ENST00000438055 CD300CQ08708 224 aa16.08■□□□□ 0.16
TTC3-209ENST00000438055 SLC13A2Q13183 592 aa16.08■□□□□ 0.16
TTC3-209ENST00000438055 SLC22A16Q86VW1 577 aa16.08■□□□□ 0.16
TTC3-209ENST00000438055 FAM217AQ8IXS0 508 aa16.08■□□□□ 0.16
TTC3-209ENST00000438055 SYNPOQ8N3V7 929 aa16.08■□□□□ 0.16
TTC3-209ENST00000438055 CEP44Q9C0F1 390 aa16.08■□□□□ 0.16
TTC3-209ENST00000438055 A0A1W2PRB8 838 aa16.07■□□□□ 0.16
TTC3-209ENST00000438055 UGDHO60701 494 aa16.07■□□□□ 0.16
TTC3-209ENST00000438055 FKTNO75072 461 aa16.07■□□□□ 0.16
TTC3-209ENST00000438055 LIPAP38571 399 aa16.07■□□□□ 0.16
TTC3-209ENST00000438055 CD97P48960 835 aa16.07■□□□□ 0.16
TTC3-209ENST00000438055 SELENOWP63302 87 aa16.07■□□□□ 0.16
TTC3-209ENST00000438055 KCNJ10P78508 379 aa16.07■□□□□ 0.16
TTC3-209ENST00000438055 CCDC71Q8IV32 467 aaPredicted RBP16.07■□□□□ 0.16
TTC3-209ENST00000438055 ZBTB8BQ8NAP8 495 aaPredicted RBP16.07■□□□□ 0.16
TTC3-209ENST00000438055 CEP19Q96LK0 163 aa16.07■□□□□ 0.16
TTC3-209ENST00000438055 ZDHHC4Q9NPG8 344 aa16.07■□□□□ 0.16
TTC3-209ENST00000438055 TMEM184CQ9NVA4 438 aa16.07■□□□□ 0.16
TTC3-209ENST00000438055 H3BN98 237 aa16.07■□□□□ 0.16
TTC3-209ENST00000438055 PRPH2P23942 346 aa16.07■□□□□ 0.16
TTC3-209ENST00000438055 CXCR4P61073 352 aa16.07■□□□□ 0.16
TTC3-209ENST00000438055 SOWAHCQ53LP3 525 aaPredicted RBP16.07■□□□□ 0.16
TTC3-209ENST00000438055 SYT6Q5T7P8 510 aaPredicted RBP16.07■□□□□ 0.16
TTC3-209ENST00000438055 FAM43BQ6ZT52 329 aaPredicted RBP16.07■□□□□ 0.16
TTC3-209ENST00000438055 VANGL1Q8TAA9 524 aaPredicted RBP16.07■□□□□ 0.16
TTC3-209ENST00000438055 IL4I1Q96RQ9 567 aa16.07■□□□□ 0.16
TTC3-209ENST00000438055 PCDHGA6Q9Y5G7 932 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms