RNA–Protein interactions for RNA: ENST00000437516.1

HLA-N-201, Transcript of major histocompatibility complex, class I, N (pseudogene), humanhuman

BASIC

Gene HLA-N, Length 135 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-N-201ENST00000437516 HLA-EP13747 358 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 ATP1B2P14415 290 aaPredicted RBP4.13□□□□□ -1.75
HLA-N-201ENST00000437516 HMGA1P17096 107 aaKnown RBP4.13□□□□□ -1.75
HLA-N-201ENST00000437516 CBLP22681 906 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 TCEA1P23193 301 aaKnown RBP4.13□□□□□ -1.75
HLA-N-201ENST00000437516 ITPKAP23677 461 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 SERPINA4P29622 427 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 TNFSF8P32971 234 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 CSTF2P33240 577 aaKnown RBP eCLIP4.13□□□□□ -1.75
HLA-N-201ENST00000437516 RPL3P39023 403 aaKnown RBP4.13□□□□□ -1.75
HLA-N-201ENST00000437516 SLC15A1P46059 708 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 LIMS1P48059 325 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 IDH2P48735 452 aaKnown RBP4.13□□□□□ -1.75
HLA-N-201ENST00000437516 NKX2-5P52952 324 aaPredicted RBP4.13□□□□□ -1.75
HLA-N-201ENST00000437516 CRYBA2P53672 197 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 CDH12P55289 794 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 CDC42P60953 191 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 RAE1P78406 368 aaKnown RBP4.13□□□□□ -1.75
HLA-N-201ENST00000437516 B4GALNT1Q00973 533 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 ACSM2AQ08AH3 577 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 FCHO2Q0JRZ9 810 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 GPR50Q13585 617 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 SCARB2Q14108 478 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 DOC2AQ14183 400 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 MBTPS1Q14703 1052 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 NCF4Q15080 339 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 CDK10Q15131 360 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 PTGES3Q15185 160 aaKnown RBP4.13□□□□□ -1.75
HLA-N-201ENST00000437516 MED22Q15528 200 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 SPIN4Q56A73 249 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 XKR6Q5GH73 641 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 CRB2Q5IJ48 1285 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 RTP2Q5QGT7 225 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 TMEM201Q5SNT2 666 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 ATAD3CQ5T2N8 411 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 GCNT6Q5T4J0 391 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 CPTPQ5TA50 214 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 ACSM2BQ68CK6 577 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 PLAG1Q6DJT9 500 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 FRMPD2BQ6IN97 320 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 SLC8B1Q6J4K2 584 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 RGMBQ6NW40 437 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 ERAP2Q6P179 960 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 TRAF7Q6Q0C0 670 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 PRSS55Q6UWB4 352 aaPredicted RBP4.13□□□□□ -1.75
HLA-N-201ENST00000437516 FAM92BQ6ZTR7 304 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 TAS1R1Q7RTX1 841 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 NANOGNBQ7Z5D8 188 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 THOC6Q86W42 341 aaKnown RBP4.13□□□□□ -1.75
HLA-N-201ENST00000437516 ATCAYQ86WG3 371 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 RAB43Q86YS6 212 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 FAM217AQ8IXS0 508 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 APCDD1Q8J025 514 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 NLGN4XQ8N0W4 816 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 NAGSQ8N159 534 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 OR8H2Q8N162 312 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 RNF175Q8N4F7 328 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 Q8N9G6 341 aaPredicted RBP4.13□□□□□ -1.75
HLA-N-201ENST00000437516 ASCC1Q8N9N2 400 aaKnown RBP4.13□□□□□ -1.75
HLA-N-201ENST00000437516 FAM181AQ8N9Y4 354 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 PCSK9Q8NBP7 692 aaKnown RBP4.13□□□□□ -1.75
HLA-N-201ENST00000437516 FAM46DQ8NEK8 389 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 B3GNT7Q8NFL0 401 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 OR4A15Q8NGL6 344 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 OR6F1Q8NGZ6 308 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 CDC26Q8NHZ8 85 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 WDR36Q8NI36 951 aaKnown RBP4.13□□□□□ -1.75
HLA-N-201ENST00000437516 UTP15Q8TED0 518 aaKnown RBP4.13□□□□□ -1.75
HLA-N-201ENST00000437516 RASSF5Q8WWW0 418 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 GEMIN6Q8WXD5 167 aaKnown RBP4.13□□□□□ -1.75
HLA-N-201ENST00000437516 KLHL6Q8WZ60 621 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 TP53INP1Q96A56 240 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 SH3KBP1Q96B97 665 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 C11orf24Q96F05 449 aaPredicted RBP4.13□□□□□ -1.75
HLA-N-201ENST00000437516 ASIC4Q96FT7 647 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 SCRN2Q96FV2 425 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 TRMT2BQ96GJ1 504 aaKnown RBP4.13□□□□□ -1.75
HLA-N-201ENST00000437516 Q96MT0 163 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 VPS35Q96QK1 796 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 OR5M11Q96RB7 305 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 MCCC1Q96RQ3 725 aaPredicted RBP4.13□□□□□ -1.75
HLA-N-201ENST00000437516 PIP5K1AQ99755 562 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 KCNS3Q9BQ31 491 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 TSEN34Q9BSV6 310 aaKnown RBP4.13□□□□□ -1.75
HLA-N-201ENST00000437516 CENPOQ9BU64 300 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 CNPPD1Q9BV87 410 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 C2orf49Q9BVC5 232 aaPredicted RBP4.13□□□□□ -1.75
HLA-N-201ENST00000437516 TAPBPLQ9BX59 468 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 ASPNQ9BXN1 380 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 TM6SF2Q9BZW4 377 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 RNF38Q9H0F5 515 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 TMEM245Q9H330 911 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 TMEM38AQ9H6F2 299 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 REEP4Q9H6H4 257 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 SGK2Q9HBY8 427 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 AMBNQ9NP70 447 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 FZD3Q9NPG1 666 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 NMRK2Q9NPI5 230 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 TRPV5Q9NQA5 729 aa4.13□□□□□ -1.75
HLA-N-201ENST00000437516 ASAH2Q9NR71 780 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms