RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 TYK2P29597 1187 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 PIK3CBP42338 1070 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 MRPS25P82663 173 aaKnown RBP8.65□□□□□ -1.02
SMC1A-203ENST00000428014 NFKB2Q00653 900 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 TGM3Q08188 693 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 ATP1A4Q13733 1029 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 SETDB1Q15047 1291 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 INAQ16352 499 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 RBBP7Q16576 425 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 HKDC1Q2TB90 917 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 C1orf189Q5VU69 101 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 RPUSD3Q6P087 351 aaKnown RBP8.65□□□□□ -1.02
SMC1A-203ENST00000428014 MBOAT1Q6ZNC8 495 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 QSOX2Q6ZRP7 698 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 ASB18Q6ZVZ8 466 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 RAPH1Q70E73 1250 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 TDRPQ86YL5 185 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 ZC3H7AQ8IWR0 971 aaKnown RBP8.65□□□□□ -1.02
SMC1A-203ENST00000428014 ARMC10Q8N2F6 343 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 MYRIPQ8NFW9 859 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 CREB3L4Q8TEY5 395 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 PPP4R1Q8TF05 950 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 PNPLA2Q96AD5 504 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 PYCR2Q96C36 320 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 MMABQ96EY8 250 aaPredicted RBP8.65□□□□□ -1.02
SMC1A-203ENST00000428014 GPR78Q96P69 363 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 PAFAH2Q99487 392 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 CCDC77Q9BR77 488 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 TMEM79Q9BSE2 394 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 LHPPQ9H008 270 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 ZNF700Q9H0M5 742 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 ZNF552Q9H707 407 aaPredicted RBP8.65□□□□□ -1.02
SMC1A-203ENST00000428014 SNX15Q9NRS6 342 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 WWOXQ9NZC7 414 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 TRPC4Q9UBN4 977 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 CTSFQ9UBX1 484 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 C3orf18Q9UK00 162 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 PPIEQ9UNP9 301 aaKnown RBP8.65□□□□□ -1.02
SMC1A-203ENST00000428014 MMACHCQ9Y4U1 282 aa8.65□□□□□ -1.02
SMC1A-203ENST00000428014 CCDC88CQ9P219 2028 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 IGHV1-45A0A0A0MS14 117 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 LRIT2A6NDA9 550 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 ARGFXA6NJG6 315 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 H0YIV9 168 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 TAPBPO15533 448 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 PHGDHO43175 533 aaKnown RBP8.64□□□□□ -1.03
SMC1A-203ENST00000428014 NDUFS4O43181 175 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 RIPK2O43353 540 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 OR1F1O43749 312 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 NRP2O60462 931 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 SORBS2O94875 1100 aaKnown RBP8.64□□□□□ -1.03
SMC1A-203ENST00000428014 WDR47O94967 919 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 MED26O95402 600 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 F7P08709 466 aaPredicted RBP8.64□□□□□ -1.03
SMC1A-203ENST00000428014 EPB42P16452 691 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 SAT1P21673 171 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 MSH2P43246 934 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 OR1D4P47884 311 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 EMP2P54851 167 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 HYAL2Q12891 473 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 NFATC3Q12968 1075 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 TSTA3Q13630 321 aaPredicted RBP8.64□□□□□ -1.03
SMC1A-203ENST00000428014 ZNF460Q14592 562 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 OR4D1Q15615 310 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 EXT1Q16394 746 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 HIST2H2ACQ16777 129 aaPredicted RBP8.64□□□□□ -1.03
SMC1A-203ENST00000428014 GGTA1PQ4G0N0 100 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 CRB2Q5IJ48 1285 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 ATP1A1-AS1Q5TC04 95 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 IRAK1BP1Q5VVH5 260 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 PLAG1Q6DJT9 500 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 HIST2H2AA3Q6FI13 130 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 H3F3CQ6NXT2 135 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 Q6ZS92 163 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 TMPRSS11BQ86T26 416 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 ANKRD53Q8N9V6 530 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 L3MBTL4Q8NA19 623 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 TEX19Q8NA77 164 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 ZNF740Q8NDX6 193 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 FDCSPQ8NFU4 85 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 OR2L5Q8NG80 312 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 OR51Q1Q8NH59 317 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 UTP15Q8TED0 518 aaKnown RBP8.64□□□□□ -1.03
SMC1A-203ENST00000428014 DCAKDQ8WVC6 231 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 TBC1D20Q96BZ9 403 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 REPS1Q96D71 796 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 IMMP1LQ96LU5 166 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 BARD1Q99728 777 aaKnown RBP8.64□□□□□ -1.03
SMC1A-203ENST00000428014 MRPL57Q9BQC6 102 aaKnown RBP8.64□□□□□ -1.03
SMC1A-203ENST00000428014 NTMT1Q9BV86 223 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 TRIM55Q9BYV6 548 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 SYNPO2LQ9H987 977 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 CAB39LQ9H9S4 337 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 ABCF3Q9NUQ8 709 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 MS4A12Q9NXJ0 267 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 CD274Q9NZQ7 290 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 OPTCQ9UBM4 332 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 SH2B3Q9UQQ2 575 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 TP53TG5Q9Y2B4 290 aa8.64□□□□□ -1.03
SMC1A-203ENST00000428014 PCDHGA11Q9Y5H2 935 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms