RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 CLPXO76031 633 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 OR4F21O95013 312 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 IGLV2-14P01704 120 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 SFTPBP07988 381 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 TMEM191BP0C7N4 346 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 SAGP10523 405 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-205ENST00000424674 NR2F6P10588 404 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 MCF2P10911 925 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 CD22P20273 847 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 GATA3P23771 443 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 UCP1P25874 307 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 SHMT1P34896 483 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 RYKP34925 604 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 LIPAP38571 399 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 CDX1P47902 265 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-205ENST00000424674 LHX1P48742 406 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 RAB9AP51151 201 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 CCNG1P51959 295 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 NAPAP54920 295 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 C21orf59P57076 290 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 RGS8P57771 180 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-205ENST00000424674 DAOAP59103 153 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 SUMO2P61956 95 aaKnown RBP3.51□□□□□ -1.85
SF3B1-205ENST00000424674 MYBPC1Q00872 1141 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 ROR2Q01974 943 aaKnown RBP3.51□□□□□ -1.85
SF3B1-205ENST00000424674 FPGSQ05932 587 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 SPOCK1Q08629 439 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 MERTKQ12866 999 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 GRIK3Q13003 919 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 HNRNPA0Q13151 305 aaKnown RBP3.51□□□□□ -1.85
SF3B1-205ENST00000424674 NAE1Q13564 534 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 ENPP2Q13822 863 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 SELPLGQ14242 412 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 PARP6Q2NL67 630 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 ADPRMQ3LIE5 342 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 CCDC14Q49A88 953 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 TSTD2Q5T7W7 516 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 AGAP6Q5VW22 663 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 MLIPQ5VWP3 458 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 TMEM268Q5VZI3 342 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 SNRNP48Q6IEG0 339 aaKnown RBP3.51□□□□□ -1.85
SF3B1-205ENST00000424674 TTC27Q6P3X3 843 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 NIPAL3Q6P499 406 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 ANKRD16Q6P6B7 361 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 BLOC1S2Q6QNY1 142 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 SYT10Q6XYQ8 523 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 SCARA5Q6ZMJ2 495 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 COLCA1Q6ZS62 124 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 C16orf62Q7Z3J2 963 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 GPR142Q7Z601 462 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 FJX1Q86VR8 437 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 MEX3DQ86XN8 651 aaKnown RBP3.51□□□□□ -1.85
SF3B1-205ENST00000424674 LAX1Q8IWV1 398 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 C16orf71Q8IYS4 520 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-205ENST00000424674 ARHGAP24Q8N264 748 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 FAM109AQ8N4B1 249 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 FNDC5Q8NAU1 212 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 SIDT2Q8NBJ9 832 aaKnown RBP3.51□□□□□ -1.85
SF3B1-205ENST00000424674 PAPD5Q8NDF8 572 aaKnown RBP3.51□□□□□ -1.85
SF3B1-205ENST00000424674 OR13F1Q8NGS4 319 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 KCNG3Q8TAE7 436 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 MYCBPAPQ8TBZ2 947 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 GPX8Q8TED1 209 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 GIPC3Q8TF64 312 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 TRIB2Q92519 343 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 PIGKQ92643 395 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 FBXL8Q96CD0 374 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 CTHRC1Q96CG8 243 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 ZC3HAV1LQ96H79 300 aaKnown RBP3.51□□□□□ -1.85
SF3B1-205ENST00000424674 ZNF479Q96JC4 524 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 ELMO2Q96JJ3 720 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 PDLIM2Q96JY6 352 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 TSNARE1Q96NA8 513 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 MTERF1Q99551 399 aaKnown RBP3.51□□□□□ -1.85
SF3B1-205ENST00000424674 OLFM1Q99784 485 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 SLC29A1Q99808 456 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 C19orf43Q9BQ61 176 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 FAM110AQ9BQ89 295 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 MXRA8Q9BRK3 442 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 PCGF1Q9BSM1 259 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 CHRDL1Q9BU40 450 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 TRMOQ9BU70 441 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 FSD1LQ9BXM9 530 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 MAGT1Q9H0U3 335 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 OR52A5Q9H2C5 316 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 RHBGQ9H310 441 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 ZNF160Q9HCG1 818 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 ZFP14Q9HCL3 533 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 Q9N2J8 555 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 PNO1Q9NRX1 252 aaKnown RBP3.51□□□□□ -1.85
SF3B1-205ENST00000424674 SEMA4GQ9NTN9 838 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 ABHD10Q9NUJ1 306 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 SLC2A8Q9NY64 477 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 SMARCAL1Q9NZC9 954 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 SEMA5BQ9P283 1151 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 CTTNBP2NLQ9P2B4 639 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 CTSFQ9UBX1 484 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 PACSIN2Q9UNF0 486 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-205ENST00000424674 NCKAP1Q9Y2A7 1128 aa3.51□□□□□ -1.85
SF3B1-205ENST00000424674 CA5BQ9Y2D0 317 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms