RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 CFAP36Q96G28 342 aa16.32■□□□□ 0.2
MSH6-203ENST00000420813 SCMH1Q96GD3 660 aa16.32■□□□□ 0.2
MSH6-203ENST00000420813 RUNDC3BQ96NL0 473 aa16.32■□□□□ 0.2
MSH6-203ENST00000420813 SIGLEC12Q96PQ1 595 aa16.32■□□□□ 0.2
MSH6-203ENST00000420813 PELI2Q9HAT8 420 aa16.32■□□□□ 0.2
MSH6-203ENST00000420813 PKDREJQ9NTG1 2253 aa16.32■□□□□ 0.2
MSH6-203ENST00000420813 TEX264Q9Y6I9 313 aa16.32■□□□□ 0.2
MSH6-203ENST00000420813 ASPDHA6ND91 283 aa16.31■□□□□ 0.2
MSH6-203ENST00000420813 URADA6NGE7 173 aa16.31■□□□□ 0.2
MSH6-203ENST00000420813 CCL21O00585 134 aa16.31■□□□□ 0.2
MSH6-203ENST00000420813 CHST10O43529 356 aa16.31■□□□□ 0.2
MSH6-203ENST00000420813 MLYCDO95822 493 aa16.31■□□□□ 0.2
MSH6-203ENST00000420813 GUCA1CO95843 209 aa16.31■□□□□ 0.2
MSH6-203ENST00000420813 CD46P15529 392 aa16.31■□□□□ 0.2
MSH6-203ENST00000420813 ZNF37AP17032 561 aaPredicted RBP16.31■□□□□ 0.2
MSH6-203ENST00000420813 PGGT1BP53609 377 aa16.31■□□□□ 0.2
MSH6-203ENST00000420813 OR4D2P58180 307 aa16.31■□□□□ 0.2
MSH6-203ENST00000420813 REEP5Q00765 189 aa16.31■□□□□ 0.2
MSH6-203ENST00000420813 OR1C1Q15619 314 aa16.31■□□□□ 0.2
MSH6-203ENST00000420813 PPP1R3AQ16821 1122 aa16.31■□□□□ 0.2
MSH6-203ENST00000420813 SP5Q6BEB4 398 aaPredicted RBP16.31■□□□□ 0.2
MSH6-203ENST00000420813 RPTNQ6XPR3 784 aa16.31■□□□□ 0.2
MSH6-203ENST00000420813 QSOX2Q6ZRP7 698 aa16.31■□□□□ 0.2
MSH6-203ENST00000420813 ZNF808Q8N4W9 903 aaPredicted RBP16.31■□□□□ 0.2
MSH6-203ENST00000420813 HORMAD2Q8N7B1 307 aa16.31■□□□□ 0.2
MSH6-203ENST00000420813 TMEM178AQ8NBL3 297 aa16.31■□□□□ 0.2
MSH6-203ENST00000420813 TRPV3Q8NET8 790 aa16.31■□□□□ 0.2
MSH6-203ENST00000420813 ELP5Q8TE02 316 aa16.31■□□□□ 0.2
MSH6-203ENST00000420813 THAP3Q8WTV1 239 aaPredicted RBP16.31■□□□□ 0.2
MSH6-203ENST00000420813 CCDC120Q96HB5 630 aa16.31■□□□□ 0.2
MSH6-203ENST00000420813 WDR83Q9BRX9 315 aaKnown RBP16.31■□□□□ 0.2
MSH6-203ENST00000420813 SLC6A16Q9GZN6 736 aa16.31■□□□□ 0.2
MSH6-203ENST00000420813 SPNS1Q9H2V7 528 aa16.31■□□□□ 0.2
MSH6-203ENST00000420813 DYRK1BQ9Y463 629 aa16.31■□□□□ 0.2
MSH6-203ENST00000420813 GABRR3A8MPY1 467 aa16.3■□□□□ 0.2
MSH6-203ENST00000420813 SERPIND1P05546 499 aa16.3■□□□□ 0.2
MSH6-203ENST00000420813 ZNF888P0CJ79 500 aaPredicted RBP16.3■□□□□ 0.2
MSH6-203ENST00000420813 EEF1DP29692 281 aaKnown RBP16.3■□□□□ 0.2
MSH6-203ENST00000420813 CASP6P55212 293 aa16.3■□□□□ 0.2
MSH6-203ENST00000420813 CDKL1Q00532 357 aa16.3■□□□□ 0.2
MSH6-203ENST00000420813 KRTCAP3Q53RY4 240 aa16.3■□□□□ 0.2
MSH6-203ENST00000420813 THOC6Q86W42 341 aaKnown RBP16.3■□□□□ 0.2
MSH6-203ENST00000420813 NKAPQ8N5F7 415 aaKnown RBP16.3■□□□□ 0.2
MSH6-203ENST00000420813 UTP15Q8TED0 518 aaKnown RBP16.3■□□□□ 0.2
MSH6-203ENST00000420813 TSNARE1Q96NA8 513 aa16.3■□□□□ 0.2
MSH6-203ENST00000420813 AIF1LQ9BQI0 150 aa16.3■□□□□ 0.2
MSH6-203ENST00000420813 RUBCNLQ9H714 662 aa16.3■□□□□ 0.2
MSH6-203ENST00000420813 ZFATQ9P243 1243 aa16.3■□□□□ 0.2
MSH6-203ENST00000420813 IKZF3Q9UKT9 509 aa16.3■□□□□ 0.2
MSH6-203ENST00000420813 KCNE2Q9Y6J6 123 aa16.3■□□□□ 0.2
MSH6-203ENST00000420813 ARHGAP10A1A4S6 786 aa16.29■□□□□ 0.2
MSH6-203ENST00000420813 MAN1A2O60476 641 aa16.29■□□□□ 0.2
MSH6-203ENST00000420813 SLC19A2O60779 497 aa16.29■□□□□ 0.2
MSH6-203ENST00000420813 SMIM10L1P0DMW3 83 aa16.29■□□□□ 0.2
MSH6-203ENST00000420813 TNFRSF8P28908 595 aa16.29■□□□□ 0.2
MSH6-203ENST00000420813 ARL4CP56559 192 aa16.29■□□□□ 0.2
MSH6-203ENST00000420813 OLR1P78380 273 aa16.29■□□□□ 0.2
MSH6-203ENST00000420813 DR1Q01658 176 aa16.29■□□□□ 0.2
MSH6-203ENST00000420813 SRSF11Q05519 484 aaKnown RBP16.29■□□□□ 0.2
MSH6-203ENST00000420813 MGAT5Q09328 741 aa16.29■□□□□ 0.2
MSH6-203ENST00000420813 HP1BP3Q5SSJ5 553 aaPredicted RBP16.29■□□□□ 0.2
MSH6-203ENST00000420813 NXPE4Q6UWF7 544 aa16.29■□□□□ 0.2
MSH6-203ENST00000420813 BNC2Q6ZN30 1099 aaPredicted RBP16.29■□□□□ 0.2
MSH6-203ENST00000420813 MRGPRGQ86SM5 289 aa16.29■□□□□ 0.2
MSH6-203ENST00000420813 TMPRSS11BQ86T26 416 aa16.29■□□□□ 0.2
MSH6-203ENST00000420813 ZC3HC1Q86WB0 502 aaKnown RBP16.29■□□□□ 0.2
MSH6-203ENST00000420813 RPS19BP1Q86WX3 136 aaKnown RBP16.29■□□□□ 0.2
MSH6-203ENST00000420813 ANKRD53Q8N9V6 530 aa16.29■□□□□ 0.2
MSH6-203ENST00000420813 FAM98AQ8NCA5 519 aaKnown RBP16.29■□□□□ 0.2
MSH6-203ENST00000420813 SMIM10Q96HG1 83 aa16.29■□□□□ 0.2
MSH6-203ENST00000420813 GPR137Q96N19 417 aa16.29■□□□□ 0.2
MSH6-203ENST00000420813 PWWP2AQ96N64 755 aa16.29■□□□□ 0.2
MSH6-203ENST00000420813 PTCHD1Q96NR3 888 aa16.29■□□□□ 0.2
MSH6-203ENST00000420813 KLHL1Q9NR64 748 aa16.29■□□□□ 0.2
MSH6-203ENST00000420813 ANKRD10Q9NXR5 420 aa16.29■□□□□ 0.2
MSH6-203ENST00000420813 TCRBV16S1A1N1A0A5B0 115 aa16.28■□□□□ 0.2
MSH6-203ENST00000420813 SAGE2PA6NJ88 616 aa16.28■□□□□ 0.2
MSH6-203ENST00000420813 NDC80O14777 642 aa16.28■□□□□ 0.2
MSH6-203ENST00000420813 PRMT3O60678 531 aa16.28■□□□□ 0.2
MSH6-203ENST00000420813 B4GALT2O60909 372 aa16.28■□□□□ 0.2
MSH6-203ENST00000420813 DNAJB6O75190 326 aa16.28■□□□□ 0.2
MSH6-203ENST00000420813 NEURL1O76050 574 aa16.28■□□□□ 0.2
MSH6-203ENST00000420813 B3GALT4O96024 378 aa16.28■□□□□ 0.2
MSH6-203ENST00000420813 SP1P08047 785 aa16.28■□□□□ 0.2
MSH6-203ENST00000420813 SERPINA6P08185 405 aa16.28■□□□□ 0.2
MSH6-203ENST00000420813 RNH1P13489 461 aaKnown RBP16.28■□□□□ 0.2
MSH6-203ENST00000420813 HNMTP50135 292 aa16.28■□□□□ 0.2
MSH6-203ENST00000420813 ITGA8P53708 1063 aa16.28■□□□□ 0.2
MSH6-203ENST00000420813 ALDH6A1Q02252 535 aaKnown RBP16.28■□□□□ 0.2
MSH6-203ENST00000420813 OC90Q02509 493 aaPredicted RBP16.28■□□□□ 0.2
MSH6-203ENST00000420813 HYAL2Q12891 473 aa16.28■□□□□ 0.2
MSH6-203ENST00000420813 NAA30Q147X3 362 aaPredicted RBP16.28■□□□□ 0.2
MSH6-203ENST00000420813 SPINK14Q6IE38 97 aa16.28■□□□□ 0.2
MSH6-203ENST00000420813 MAGED4Q96JG8 741 aa16.28■□□□□ 0.2
MSH6-203ENST00000420813 FRMD6Q96NE9 622 aa16.28■□□□□ 0.2
MSH6-203ENST00000420813 HES7Q9BYE0 225 aa16.28■□□□□ 0.2
MSH6-203ENST00000420813 CDCP1Q9H5V8 836 aa16.28■□□□□ 0.2
MSH6-203ENST00000420813 PRDM9Q9NQV7 894 aa16.28■□□□□ 0.2
MSH6-203ENST00000420813 TRMT1Q9NXH9 659 aaKnown RBP16.28■□□□□ 0.2
MSH6-203ENST00000420813 LRFN1Q9P244 771 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms