RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 SVOPQ8N4V2 548 aa12.71□□□□□ -0.37
TNFRSF8-203ENST00000417814 OR2AP1Q8NGE2 309 aa12.71□□□□□ -0.37
TNFRSF8-203ENST00000417814 CHPT1Q8WUD6 406 aa12.71□□□□□ -0.37
TNFRSF8-203ENST00000417814 ITPKCQ96DU7 683 aa12.71□□□□□ -0.37
TNFRSF8-203ENST00000417814 CPPED1Q9BRF8 314 aaPredicted RBP12.71□□□□□ -0.37
TNFRSF8-203ENST00000417814 TRMT61BQ9BVS5 477 aaKnown RBP12.71□□□□□ -0.37
TNFRSF8-203ENST00000417814 WDR12Q9GZL7 423 aaKnown RBP12.71□□□□□ -0.37
TNFRSF8-203ENST00000417814 RPS6KA6Q9UK32 745 aa12.71□□□□□ -0.37
TNFRSF8-203ENST00000417814 LYVE1Q9Y5Y7 322 aa12.71□□□□□ -0.37
TNFRSF8-203ENST00000417814 MYLKQ15746 1914 aa12.71□□□□□ -0.38
TNFRSF8-203ENST00000417814 BRCA1P38398 1863 aaKnown RBP12.71□□□□□ -0.38
TNFRSF8-203ENST00000417814 KIAA0513O60268 411 aa12.71□□□□□ -0.38
TNFRSF8-203ENST00000417814 PRKRAO75569 313 aaKnown RBP12.71□□□□□ -0.38
TNFRSF8-203ENST00000417814 MED26O95402 600 aa12.71□□□□□ -0.38
TNFRSF8-203ENST00000417814 NTN1O95631 604 aa12.71□□□□□ -0.38
TNFRSF8-203ENST00000417814 EOMESO95936 686 aa12.71□□□□□ -0.38
TNFRSF8-203ENST00000417814 PRR35P0CG20 571 aa12.71□□□□□ -0.38
TNFRSF8-203ENST00000417814 CD40LGP29965 261 aa12.71□□□□□ -0.38
TNFRSF8-203ENST00000417814 INPP1P49441 399 aa12.71□□□□□ -0.38
TNFRSF8-203ENST00000417814 CLDN8P56748 225 aa12.71□□□□□ -0.38
TNFRSF8-203ENST00000417814 RAB15P59190 212 aa12.71□□□□□ -0.38
TNFRSF8-203ENST00000417814 SNRPD1P62314 119 aaKnown RBP12.71□□□□□ -0.38
TNFRSF8-203ENST00000417814 CSTF3Q12996 717 aaKnown RBP12.71□□□□□ -0.38
TNFRSF8-203ENST00000417814 ZNF284Q2VY69 593 aa12.71□□□□□ -0.38
TNFRSF8-203ENST00000417814 PLEKHG6Q3KR16 790 aa12.71□□□□□ -0.38
TNFRSF8-203ENST00000417814 ATAD3BQ5T9A4 648 aa12.71□□□□□ -0.38
TNFRSF8-203ENST00000417814 ENTHD1Q8IYW4 607 aa12.71□□□□□ -0.38
TNFRSF8-203ENST00000417814 DPP10Q8N608 796 aa12.71□□□□□ -0.38
TNFRSF8-203ENST00000417814 AMER2Q8N7J2 671 aa12.71□□□□□ -0.38
TNFRSF8-203ENST00000417814 TRNT1Q96Q11 434 aaKnown RBP12.71□□□□□ -0.38
TNFRSF8-203ENST00000417814 KCNH6Q9H252 994 aa12.71□□□□□ -0.38
TNFRSF8-203ENST00000417814 COMMD3Q9UBI1 195 aa12.71□□□□□ -0.38
TNFRSF8-203ENST00000417814 FPR1P21462 350 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 HBA1P69905 142 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 MAP4K2Q12851 820 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 PPIGQ13427 754 aaKnown RBP eCLIP12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 RAET1GQ6H3X3 334 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 BRAT1Q6PJG6 821 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 DHRS4L2Q6PKH6 230 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 TMIGD1Q6UXZ0 262 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 RD3Q7Z3Z2 195 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 HSD11B1LQ7Z5J1 315 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 GPR149Q86SP6 731 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 ARMC8Q8IUR7 673 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 CCDC71Q8IV32 467 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 TCEANCQ8N8B7 351 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 PCNPQ8WW12 178 aaKnown RBP12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 MTERF3Q96E29 417 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 FOPNLQ96NB1 174 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 NEDD4LQ96PU5 975 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 FAM129BQ96TA1 746 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 QRSL1Q9H0R6 528 aaKnown RBP12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 POPDC3Q9HBV1 291 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 MRPS7Q9Y2R9 242 aaKnown RBP12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 SNX11Q9Y5W9 270 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 A0A1W2PQ45 241 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 A0A1W2PQY0 241 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 LEFTY1O75610 366 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 BUD31P41223 144 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 SNRPD2P62316 118 aaKnown RBP12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 TLE2Q04725 743 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 KRT33BQ14525 404 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 PLEKHG7Q6ZR37 379 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 ZNF614Q8N883 585 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 NEIL2Q969S2 332 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 PPCDCQ96CD2 204 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 AP2M1Q96CW1 435 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 P2RY12Q9H244 342 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 YARS2Q9Y2Z4 477 aaKnown RBP12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 SPAG17Q6Q759 2223 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 TRBC2A0A5B9 178 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 TRIM64CA6NLI5 447 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 NOTOA8MTQ0 251 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 TMCC2O75069 709 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 SULT1C4O75897 302 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 GADD45GO95257 159 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 F11P03951 625 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 ATP1B2P14415 290 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 AOAHP28039 575 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 HLA-FP30511 346 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 CNR2P34972 360 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 B4GALNT1Q00973 533 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 PTSQ03393 145 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 ARTNQ5T4W7 220 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 C11orf65Q8NCR3 313 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 ZNF461Q8TAF7 563 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 TCEAL4Q96EI5 215 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 CASD1Q96PB1 797 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 YME1L1Q96TA2 773 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 ITPAQ9BY32 194 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 MUC13Q9H3R2 512 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 SERHLQ9NQF3 203 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 QPCTLQ9NXS2 382 aa12.7□□□□□ -0.38
TNFRSF8-203ENST00000417814 NYNRINQ9P2P1 1898 aaKnown RBP12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 ARHGEF33A8MVX0 844 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 FAM47E-STBD1D6RA91 191 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 PPM1DO15297 605 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 TLX2O43763 284 aaPredicted RBP12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 PEPDP12955 493 aa12.69□□□□□ -0.38
TNFRSF8-203ENST00000417814 SELPP16109 830 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms