RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 NUPL2O15504 423 aaKnown RBP14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 FABP7O15540 132 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 ULK1O75385 1050 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 OR4Q2P0C623 313 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 PSMA1P25786 263 aaKnown RBP14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 TIGD5Q53EQ6 642 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 RGL4Q8IZJ4 473 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 OR4K2Q8NGD2 314 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 OR9Q1Q8NGQ5 310 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 DNAJA4Q8WW22 397 aaPredicted RBP14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 ULK4Q96C45 1275 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 METTL2AQ96IZ6 378 aaKnown RBP14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 C8orf48Q96LL4 319 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 GTPBP2Q9BX10 602 aaKnown RBP14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 CLMPQ9H6B4 373 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 PLCXD1Q9NUJ7 323 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 Q9Y3F1 56 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 CFAP20Q9Y6A4 193 aaKnown RBP14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 PLOD3O60568 738 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 NBNO60934 754 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 CPSF4O95639 269 aaKnown RBP14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 ATXN1LP0C7T5 689 aaKnown RBP14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 BCKDHAP12694 445 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 KCNE1P15382 129 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 GZMMP51124 257 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 LIMK1P53667 647 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 BTN1A1Q13410 526 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 FGFBP1Q14512 234 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 LARS2Q15031 903 aaKnown RBP14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 OR4F3Q6IEY1 312 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 ZNF680Q8NEM1 530 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 QRFPRQ96P65 431 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 DCLRE1CQ96SD1 692 aaKnown RBP14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 NIPSNAP1Q9BPW8 284 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 ATP13A1Q9HD20 1204 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 TMEM45AQ9NWC5 275 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 COMMD3Q9UBI1 195 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 CLEC2DQ9UHP7 191 aa14.18□□□□□ -0.14
NCKIPSD-204ENST00000416649 WNT9AO14904 365 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 GPR39O43194 453 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 OTCP00480 354 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 OPN1SWP03999 348 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 SLC2A2P11168 524 aaPredicted RBP14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 LIPKQ5VXJ0 399 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 TYW3Q6IPR3 259 aaKnown RBP14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 ARSKQ6UWY0 536 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 ZBTB44Q8NCP5 570 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 OR10G2Q8NGC3 310 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 ZNF431Q8TF32 576 aaPredicted RBP14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 ELOVL6Q9H5J4 265 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 DLGAP4Q9Y2H0 992 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 DERAQ9Y315 318 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 TRBV5-3A0A0A0MS03 114 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 FGF10O15520 208 aaPredicted RBP14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 ENGP17813 658 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 PBX3P40426 434 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 OR1E2P47887 323 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 MLLT6P55198 1093 aaPredicted RBP14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 CASP9P55211 416 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 CDH12P55289 794 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 CAV3P56539 151 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 RRAS2P62070 204 aaPredicted RBP14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 ZXDBP98169 803 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 RGS1Q08116 209 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 MFSD13AQ14CX5 517 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 VMACQ2NL98 169 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 SLC39A12Q504Y0 691 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 MSANTD2Q6P1R3 559 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 OPALINQ96PE5 141 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 FAM129BQ96TA1 746 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 RAD9AQ99638 391 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 KCNH6Q9H252 994 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 MIXL1Q9H2W2 232 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 HHATLQ9HCP6 504 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 BPIFA1Q9NP55 256 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 HCSTQ9UBK5 93 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 STOML2Q9UJZ1 356 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 ZNF222Q9UK12 451 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 MAPRE3Q9UPY8 281 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 MAN2B2Q9Y2E5 1009 aa14.17□□□□□ -0.14
NCKIPSD-204ENST00000416649 CLIC1O00299 241 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 ARSBP15848 533 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 ACLYP53396 1101 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 ITGA1P56199 1179 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 NOGQ13253 232 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 CPSF6Q16630 551 aaKnown RBP eCLIP14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 TOR1AIP1Q5JTV8 583 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 GARNL3Q5VVW2 1013 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 TIGD3Q6B0B8 471 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 GPR65Q8IYL9 337 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 C9orf62Q8N4C0 152 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 RTL3Q8N8U3 475 aaKnown RBP14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 OR9Q2Q8NGE9 314 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 LHFPL5Q8TAF8 219 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 UPRTQ96BW1 309 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 HYLS1Q96M11 299 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 PANX1Q96RD7 426 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 DPCDQ9BVM2 203 aaPredicted RBP14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 C1QTNF3Q9BXJ4 246 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms