RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 PNPLA2Q96AD5 504 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 SLC45A3Q96JT2 553 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 NLGN3Q9NZ94 848 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 PCDHB3Q9Y5E6 796 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 MYH7BA7E2Y1 1941 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 C17orf113A0A1B0GUU1 675 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 TCRBV5S1A1TA0A578 114 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 CD2P06729 351 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 FHP07954 510 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 CYP4B1P13584 511 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 GSTT1P30711 240 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 SLC6A4P31645 630 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 CDKN2DP55273 166 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 MERTKQ12866 999 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 TARDBPQ13148 414 aaKnown RBP eCLIP11.54□□□□□ -0.566e-7■■■■■ 33
PTPRF-205ENST00000414879 TYSND1Q2T9J0 566 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 PHF19Q5T6S3 580 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 SYVN1Q86TM6 617 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 AURKBQ96GD4 344 aaPredicted RBP11.54□□□□□ -0.56
PTPRF-205ENST00000414879 TIMMDC1Q9NPL8 285 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 TOR4AQ9NXH8 423 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 ZNF624Q9P2J8 865 aaPredicted RBP11.54□□□□□ -0.56
PTPRF-205ENST00000414879 PADI2Q9Y2J8 665 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 hCG_2039718K7EN88 272 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 SAP18O00422 153 aaKnown RBP11.54□□□□□ -0.56
PTPRF-205ENST00000414879 AHCYL1O43865 530 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 MATN1P21941 496 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 GLDCP23378 1020 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 YPEL5P62699 121 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 GRM7Q14831 915 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 KIR2DS3Q14952 304 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 CEP97Q8IW35 865 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 FUBP1Q96AE4 644 aaKnown RBP11.54□□□□□ -0.56
PTPRF-205ENST00000414879 COMMD4Q9H0A8 199 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 PRTFDC1Q9NRG1 225 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 PNO1Q9NRX1 252 aaKnown RBP11.54□□□□□ -0.56
PTPRF-205ENST00000414879 MCM8Q9UJA3 840 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 PCTPQ9UKL6 214 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 TMEM233B4DJY2 109 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 E7ENX8 843 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 H7BY64 318 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 TP53I11O14683 189 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 PDCD5O14737 125 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 NCK1P16333 377 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 POLR2CP19387 275 aaPredicted RBP11.54□□□□□ -0.56
PTPRF-205ENST00000414879 SDC2P34741 201 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 TGFBR2P37173 567 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 DOC2AQ14183 400 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 RCAN2Q14206 197 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 NPTX1Q15818 432 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 RGS21Q2M5E4 152 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 EML3Q32P44 896 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 TRAF7Q6Q0C0 670 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 LGI4Q8N135 537 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 ARRDC2Q8TBH0 407 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 TMEM234Q8WY98 164 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 PRAP1Q96NZ9 151 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 PTGES2Q9H7Z7 377 aa11.54□□□□□ -0.56
PTPRF-205ENST00000414879 TNFRSF10BO14763 440 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 LDB2O43679 373 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 ASNA1O43681 348 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 CYP17A1P05093 508 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 LYNP07948 512 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 DHRS4L1P0CG22 281 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 CD9P21926 228 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 ACADLP28330 430 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 ADARP55265 1226 aaKnown RBP11.53□□□□□ -0.56
PTPRF-205ENST00000414879 CRB2Q5IJ48 1285 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 SLC2A7Q6PXP3 512 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 TAS1R1Q7RTX1 841 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 MRPL38Q96DV4 380 aaKnown RBP11.53□□□□□ -0.56
PTPRF-205ENST00000414879 ZNF570Q96NI8 536 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 IKZF2Q9UKS7 526 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 H0YJX3 145 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 PRKD3O94806 890 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 PGM3O95394 542 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 H6PDO95479 791 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 ZNF3P17036 446 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 OMPP47874 163 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 DGKQP52824 942 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 TRAM2Q15035 370 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 PON2Q15165 354 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 PDZD3Q86UT5 571 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 C19orf43Q9BQ61 176 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 IFT27Q9BW83 186 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 CCDC106Q9BWC9 280 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 MAGIXQ9H6Y5 334 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 COQ10BQ9H8M1 238 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 TUBA8Q9NY65 449 aaPredicted RBP11.53□□□□□ -0.56
PTPRF-205ENST00000414879 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.53□□□□□ -0.56
PTPRF-205ENST00000414879 WDR45Q9Y484 360 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 CFAP20Q9Y6A4 193 aaKnown RBP11.53□□□□□ -0.56
PTPRF-205ENST00000414879 M0QX08 132 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 BCKDHAP12694 445 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 HOXC12P31275 282 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 RAB25P57735 213 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 DCDC1P59894 354 aa11.53□□□□□ -0.56
PTPRF-205ENST00000414879 TRA2BP62995 288 aaKnown RBP11.53□□□□□ -0.56
PTPRF-205ENST00000414879 POU6F2P78424 691 aaPredicted RBP11.53□□□□□ -0.56
PTPRF-205ENST00000414879 NTHL1P78549 312 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms