RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 ZNF490Q9ULM2 529 aaPredicted RBP23.96■■□□□ 1.43
CPNE1-207ENST00000414664 G3BP2Q9UN86 482 aaKnown RBP23.96■■□□□ 1.43
CPNE1-207ENST00000414664 ATMQ13315 3056 aa23.96■■□□□ 1.43
CPNE1-207ENST00000414664 PCDH17O14917 1159 aa23.95■■□□□ 1.42
CPNE1-207ENST00000414664 CDH16O75309 829 aa23.95■■□□□ 1.42
CPNE1-207ENST00000414664 RDH16O75452 317 aa23.95■■□□□ 1.42
CPNE1-207ENST00000414664 TUBBP07437 444 aa23.95■■□□□ 1.42
CPNE1-207ENST00000414664 HEXBP07686 556 aa23.95■■□□□ 1.42
CPNE1-207ENST00000414664 KRT15P19012 456 aa23.95■■□□□ 1.42
CPNE1-207ENST00000414664 HNF4AP41235 474 aa23.95■■□□□ 1.42
CPNE1-207ENST00000414664 CCL11P51671 97 aa23.95■■□□□ 1.42
CPNE1-207ENST00000414664 HYAL2Q12891 473 aa23.95■■□□□ 1.42
CPNE1-207ENST00000414664 CHAF1BQ13112 559 aa23.95■■□□□ 1.42
CPNE1-207ENST00000414664 GTF2H2Q13888 395 aa23.95■■□□□ 1.42
CPNE1-207ENST00000414664 DEFB134Q4QY38 66 aa23.95■■□□□ 1.42
CPNE1-207ENST00000414664 CPZQ66K79 652 aa23.95■■□□□ 1.42
CPNE1-207ENST00000414664 GTF2H2CQ6P1K8 395 aa23.95■■□□□ 1.42
CPNE1-207ENST00000414664 MED27Q6P2C8 311 aa23.95■■□□□ 1.42
CPNE1-207ENST00000414664 ZC3H7AQ8IWR0 971 aaKnown RBP23.95■■□□□ 1.42
CPNE1-207ENST00000414664 CLEC1AQ8NC01 280 aa23.95■■□□□ 1.42
CPNE1-207ENST00000414664 MZB1Q8WU39 189 aa23.95■■□□□ 1.42
CPNE1-207ENST00000414664 TRIM55Q9BYV6 548 aa23.95■■□□□ 1.42
CPNE1-207ENST00000414664 HCN3Q9P1Z3 774 aa23.95■■□□□ 1.42
CPNE1-207ENST00000414664 DCDC2Q9UHG0 476 aa23.95■■□□□ 1.42
CPNE1-207ENST00000414664 HS3ST3B1Q9Y662 390 aa23.95■■□□□ 1.42
CPNE1-207ENST00000414664 IDSB3KWA1 339 aa23.94■■□□□ 1.42
CPNE1-207ENST00000414664 SIX3O95343 332 aaPredicted RBP23.94■■□□□ 1.42
CPNE1-207ENST00000414664 BMP10O95393 424 aa23.94■■□□□ 1.42
CPNE1-207ENST00000414664 PYGBP11216 843 aa23.94■■□□□ 1.42
CPNE1-207ENST00000414664 CD22P20273 847 aa23.94■■□□□ 1.42
CPNE1-207ENST00000414664 TAC1P20366 129 aa23.94■■□□□ 1.42
CPNE1-207ENST00000414664 EEF1DP29692 281 aaKnown RBP23.94■■□□□ 1.42
CPNE1-207ENST00000414664 SERPINB1P30740 379 aa23.94■■□□□ 1.42
CPNE1-207ENST00000414664 XCR1P46094 333 aa23.94■■□□□ 1.42
CPNE1-207ENST00000414664 SLCO1A2P46721 670 aa23.94■■□□□ 1.42
CPNE1-207ENST00000414664 RAB8AP61006 207 aa23.94■■□□□ 1.42
CPNE1-207ENST00000414664 DCAF10Q5QP82 559 aa23.94■■□□□ 1.42
CPNE1-207ENST00000414664 LIPJQ5W064 366 aa23.94■■□□□ 1.42
CPNE1-207ENST00000414664 GOLGA7Q7Z5G4 137 aa23.94■■□□□ 1.42
CPNE1-207ENST00000414664 LAPTM4BQ86VI4 370 aa23.94■■□□□ 1.42
CPNE1-207ENST00000414664 TMEM151BQ8IW70 566 aa23.94■■□□□ 1.42
CPNE1-207ENST00000414664 CAVIN3Q969G5 261 aa23.94■■□□□ 1.42
CPNE1-207ENST00000414664 GAL3ST3Q96A11 431 aa23.94■■□□□ 1.42
CPNE1-207ENST00000414664 FAR2Q96K12 515 aa23.94■■□□□ 1.42
CPNE1-207ENST00000414664 PARD6BQ9BYG5 372 aa23.94■■□□□ 1.42
CPNE1-207ENST00000414664 IPPKQ9H8X2 491 aa23.94■■□□□ 1.42
CPNE1-207ENST00000414664 ACTR8Q9H981 624 aa23.94■■□□□ 1.42
CPNE1-207ENST00000414664 ADGRE2Q9UHX3 823 aa23.94■■□□□ 1.42
CPNE1-207ENST00000414664 MKL2Q9ULH7 1088 aa23.94■■□□□ 1.42
CPNE1-207ENST00000414664 SCN3AQ9NY46 2000 aa23.94■■□□□ 1.42
CPNE1-207ENST00000414664 A0A088AWK7 358 aa23.93■■□□□ 1.42
CPNE1-207ENST00000414664 SMIM23A6NLE4 172 aa23.93■■□□□ 1.42
CPNE1-207ENST00000414664 GOLGA8RI6L899 631 aa23.93■■□□□ 1.42
CPNE1-207ENST00000414664 E2F3O00716 465 aa23.93■■□□□ 1.42
CPNE1-207ENST00000414664 SOCS6O14544 535 aa23.93■■□□□ 1.42
CPNE1-207ENST00000414664 UGDHO60701 494 aa23.93■■□□□ 1.42
CPNE1-207ENST00000414664 DNAJB5O75953 348 aa23.93■■□□□ 1.42
CPNE1-207ENST00000414664 PRB1P04280 392 aa23.93■■□□□ 1.42
CPNE1-207ENST00000414664 CYC1P08574 325 aa23.93■■□□□ 1.42
CPNE1-207ENST00000414664 NUDT17P0C025 328 aa23.93■■□□□ 1.42
CPNE1-207ENST00000414664 SMIM10L1P0DMW3 83 aa23.93■■□□□ 1.42
CPNE1-207ENST00000414664 ZNF10P21506 573 aaPredicted RBP23.93■■□□□ 1.42
CPNE1-207ENST00000414664 GRHL2Q6ISB3 625 aa23.93■■□□□ 1.42
CPNE1-207ENST00000414664 TCTN3Q6NUS6 607 aa23.93■■□□□ 1.42
CPNE1-207ENST00000414664 LAS2Q8IYD9 372 aa23.93■■□□□ 1.42
CPNE1-207ENST00000414664 EPS8L3Q8TE67 593 aaKnown RBP23.93■■□□□ 1.42
CPNE1-207ENST00000414664 SMIM10Q96HG1 83 aa23.93■■□□□ 1.42
CPNE1-207ENST00000414664 OR1F2PQ96R84 312 aa23.93■■□□□ 1.42
CPNE1-207ENST00000414664 KLHL31Q9H511 634 aa23.93■■□□□ 1.42
CPNE1-207ENST00000414664 ATP13A2Q9NQ11 1180 aa23.93■■□□□ 1.42
CPNE1-207ENST00000414664 TMEM216Q9P0N5 145 aa23.93■■□□□ 1.42
CPNE1-207ENST00000414664 LRIT2A6NDA9 550 aa23.92■■□□□ 1.42
CPNE1-207ENST00000414664 ZNF860A6NHJ4 632 aa23.92■■□□□ 1.42
CPNE1-207ENST00000414664 LRRC14BA6NHZ5 514 aa23.92■■□□□ 1.42
CPNE1-207ENST00000414664 TGM3Q08188 693 aa23.92■■□□□ 1.42
CPNE1-207ENST00000414664 IFFO1Q0D2I5 559 aa23.92■■□□□ 1.42
CPNE1-207ENST00000414664 C19orf57Q0VDD7 668 aa23.92■■□□□ 1.42
CPNE1-207ENST00000414664 TUBB8Q3ZCM7 444 aa23.92■■□□□ 1.42
CPNE1-207ENST00000414664 MFSD4BQ5TF39 518 aa23.92■■□□□ 1.42
CPNE1-207ENST00000414664 KIRREL2Q6UWL6 708 aa23.92■■□□□ 1.42
CPNE1-207ENST00000414664 MYLK4Q86YV6 388 aaPredicted RBP23.92■■□□□ 1.42
CPNE1-207ENST00000414664 TMEM151AQ8N4L1 468 aa23.92■■□□□ 1.42
CPNE1-207ENST00000414664 METTL21AQ8WXB1 218 aa23.92■■□□□ 1.42
CPNE1-207ENST00000414664 ATP6V1E2Q96A05 226 aa23.92■■□□□ 1.42
CPNE1-207ENST00000414664 SLC25A23Q9BV35 468 aa23.92■■□□□ 1.42
CPNE1-207ENST00000414664 FBXL4Q9UKA2 621 aa23.92■■□□□ 1.42
CPNE1-207ENST00000414664 PCDHGA9Q9Y5G4 932 aaKnown RBP23.92■■□□□ 1.42
CPNE1-207ENST00000414664 PCDHGA11Q9Y5H2 935 aa23.92■■□□□ 1.42
CPNE1-207ENST00000414664 A0A1W2PPM1 405 aa23.91■■□□□ 1.42
CPNE1-207ENST00000414664 KLHL41O60662 606 aa23.91■■□□□ 1.42
CPNE1-207ENST00000414664 PCNAP12004 261 aa23.91■■□□□ 1.42
CPNE1-207ENST00000414664 ACPPP15309 386 aa23.91■■□□□ 1.42
CPNE1-207ENST00000414664 AIMP2Q13155 320 aaKnown RBP23.91■■□□□ 1.42
CPNE1-207ENST00000414664 ADPRMQ3LIE5 342 aa23.91■■□□□ 1.42
CPNE1-207ENST00000414664 MINDY4Q4G0A6 757 aa23.91■■□□□ 1.42
CPNE1-207ENST00000414664 LACTB2Q53H82 288 aaPredicted RBP23.91■■□□□ 1.42
CPNE1-207ENST00000414664 TRIM40Q6P9F5 258 aa23.91■■□□□ 1.42
CPNE1-207ENST00000414664 VN1R5Q7Z5H4 357 aa23.91■■□□□ 1.42
CPNE1-207ENST00000414664 RIBC1Q8N443 379 aaPredicted RBP23.91■■□□□ 1.42
CPNE1-207ENST00000414664 SRFBP1Q8NEF9 429 aaKnown RBP23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms