RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 TRIM64BA6NI03 449 aa13.3□□□□□ -0.28
SMARCA4-202ENST00000413806 BCHEP06276 602 aa13.3□□□□□ -0.28
SMARCA4-202ENST00000413806 PABPC4LP0CB38 370 aaKnown RBP13.3□□□□□ -0.28
SMARCA4-202ENST00000413806 ZNF823P16415 610 aa13.3□□□□□ -0.28
SMARCA4-202ENST00000413806 SLC11A1P49279 550 aa13.3□□□□□ -0.28
SMARCA4-202ENST00000413806 ADAM8P78325 824 aa13.3□□□□□ -0.28
SMARCA4-202ENST00000413806 SCAPQ12770 1279 aa13.3□□□□□ -0.28
SMARCA4-202ENST00000413806 PTCHD3Q3KNS1 767 aa13.3□□□□□ -0.28
SMARCA4-202ENST00000413806 RABL3Q5HYI8 236 aa13.3□□□□□ -0.28
SMARCA4-202ENST00000413806 SPANXN4Q5MJ08 99 aa13.3□□□□□ -0.28
SMARCA4-202ENST00000413806 LRRN1Q6UXK5 716 aa13.3□□□□□ -0.28
SMARCA4-202ENST00000413806 HACD2Q6Y1H2 254 aa13.3□□□□□ -0.28
SMARCA4-202ENST00000413806 CAMKVQ8NCB2 501 aa13.3□□□□□ -0.28
SMARCA4-202ENST00000413806 TMEM74Q96NL1 305 aa13.3□□□□□ -0.28
SMARCA4-202ENST00000413806 SLC38A3Q99624 504 aa13.3□□□□□ -0.28
SMARCA4-202ENST00000413806 RANBP3Q9H6Z4 567 aaPredicted RBP13.3□□□□□ -0.28
SMARCA4-202ENST00000413806 RBM7Q9Y580 266 aaKnown RBP13.3□□□□□ -0.28
SMARCA4-202ENST00000413806 CICQ96RK0 1608 aaPredicted RBP13.3□□□□□ -0.28
SMARCA4-202ENST00000413806 SDHDO14521 159 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 ITGA10O75578 1167 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 NOVP48745 357 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 RAB39AQ14964 217 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 TSTQ16762 297 aaKnown RBP13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 ATG9BQ674R7 924 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 AGTRAPQ6RW13 159 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 QSOX2Q6ZRP7 698 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 OR5AK3PQ8NH89 298 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 C15orf40Q8WUR7 153 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 TRUB1Q8WWH5 349 aaKnown RBP13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 SCLYQ96I15 445 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 KCNA7Q96RP8 456 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 CLCC1Q96S66 551 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 WACQ9BTA9 647 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 FUOMA2VDF0 154 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 XPNPEP2O43895 674 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 RCBTB2O95199 551 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 CLCN7P51798 805 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 FAPQ12884 760 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 UPP1Q16831 310 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 EIF5AL1Q6IS14 154 aaKnown RBP13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 TREML1Q86YW5 311 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 THAP6Q8TBB0 222 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 FAM110BQ8TC76 370 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 GAL3ST4Q96RP7 486 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 COQ9O75208 318 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 ENTPD6O75354 484 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 ACP5P13686 325 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 PSMA6P60900 246 aaKnown RBP13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 NIPAL4Q0D2K0 466 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 SIX1Q15475 284 aaPredicted RBP13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 TXNDC8Q6A555 127 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 Q6ZVU0 165 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 AP1S3Q96PC3 154 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 FIZ1Q96SL8 496 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 BARD1Q99728 777 aaKnown RBP13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 FUZQ9BT04 418 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 KCNH6Q9H252 994 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 PLEKHA1Q9HB21 404 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 UTS2RQ9UKP6 389 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 TLX3O43711 291 aaPredicted RBP13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 APOC3P02656 99 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 RFC2P35250 354 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 GOLM1Q8NBJ4 401 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 ZNF471Q9BX82 626 aaPredicted RBP13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 NSUN3Q9H649 340 aaKnown RBP13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 COQ3Q9NZJ6 369 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 TNFRSF10DQ9UBN6 386 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 MED31Q9Y3C7 131 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 ELOA3DA6NLF2 546 aaPredicted RBP13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 ERI3O43414 337 aaKnown RBP13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 OPN1SWP03999 348 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 FNTBP49356 437 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 ELOA3BQ3SY89 546 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 ZDHHC14Q8IZN3 488 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 ZNF527Q8NB42 609 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 ELOA3Q8NG57 546 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 DENND1AQ8TEH3 1009 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 FBXL20Q96IG2 436 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 SLC45A3Q96JT2 553 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 MRGPRX2Q96LB1 330 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 PRRG4Q9BZD6 226 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 ADAP2Q9NPF8 381 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 TAC3Q9UHF0 121 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 RNF6Q9Y252 685 aa13.29□□□□□ -0.28
SMARCA4-202ENST00000413806 TMEM150CB9EJG8 249 aa13.28□□□□□ -0.28
SMARCA4-202ENST00000413806 FANCGO15287 622 aa13.28□□□□□ -0.28
SMARCA4-202ENST00000413806 MTX2O75431 263 aa13.28□□□□□ -0.28
SMARCA4-202ENST00000413806 SNAI1O95863 264 aaPredicted RBP13.28□□□□□ -0.28
SMARCA4-202ENST00000413806 MPC1LP0DKB6 136 aa13.28□□□□□ -0.28
SMARCA4-202ENST00000413806 ST3GAL3Q11203 375 aa13.28□□□□□ -0.28
SMARCA4-202ENST00000413806 ANKDD1AQ495B1 522 aa13.28□□□□□ -0.28
SMARCA4-202ENST00000413806 CD300LFQ8TDQ1 290 aa13.28□□□□□ -0.28
SMARCA4-202ENST00000413806 MMP27Q9H306 513 aa13.28□□□□□ -0.28
SMARCA4-202ENST00000413806 OARD1Q9Y530 152 aa13.28□□□□□ -0.28
SMARCA4-202ENST00000413806 POP7O75817 140 aaKnown RBP13.28□□□□□ -0.28
SMARCA4-202ENST00000413806 DNAJB5O75953 348 aa13.28□□□□□ -0.28
SMARCA4-202ENST00000413806 CSF2P04141 144 aa13.28□□□□□ -0.28
SMARCA4-202ENST00000413806 MAT2AP31153 395 aaKnown RBP13.28□□□□□ -0.28
SMARCA4-202ENST00000413806 CASP9P55211 416 aa13.28□□□□□ -0.28
SMARCA4-202ENST00000413806 CLDN10P78369 228 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms