RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 RPS19BP1Q86WX3 136 aaKnown RBP8.96□□□□□ -0.98
RFFL-203ENST00000413582 LRRC6Q86X45 466 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 KLHL7Q8IXQ5 586 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 KIF2BQ8N4N8 673 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 CCDC89Q8N998 374 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 PPFIBP2Q8ND30 876 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 ELP5Q8TE02 316 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 LRRC1Q9BTT6 524 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 RBCK1Q9BYM8 510 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 TP63Q9H3D4 680 aaPredicted RBP8.96□□□□□ -0.98
RFFL-203ENST00000413582 LIME1Q9H400 295 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 CDCP1Q9H5V8 836 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 ZNF358Q9NW07 568 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 DNAJB12Q9NXW2 375 aaKnown RBP8.96□□□□□ -0.98
RFFL-203ENST00000413582 ST6GALNAC2Q9UJ37 374 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 ANAPC5Q9UJX4 755 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 UTP11Q9Y3A2 253 aaKnown RBP8.96□□□□□ -0.98
RFFL-203ENST00000413582 BOLA1Q9Y3E2 137 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 L3MBTL1Q9Y468 752 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 RTTNQ86VV8 2226 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 FAM237BA0A1B0GVD1 139 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 MAGEB17A8MXT2 336 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 E7ENX8 843 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 SMAPO00193 183 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 CD3EAPO15446 510 aaKnown RBP8.95□□□□□ -0.98
RFFL-203ENST00000413582 RAD51CO43502 376 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 HS6ST1O60243 411 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 CDC40O60508 579 aaKnown RBP eCLIP8.95□□□□□ -0.98
RFFL-203ENST00000413582 NIPSNAP2O75323 286 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 RDH16O75452 317 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 PSIP1O75475 530 aaKnown RBP8.95□□□□□ -0.98
RFFL-203ENST00000413582 CTAG2O75638 210 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 CDC123O75794 336 aaPredicted RBP8.95□□□□□ -0.98
RFFL-203ENST00000413582 SLC16A8O95907 504 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 ETS1P14921 441 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 TRHRP34981 398 aaPredicted RBP8.95□□□□□ -0.98
RFFL-203ENST00000413582 KCNJ1P48048 391 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 CYB561P49447 251 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 ITGA8P53708 1063 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 EIF3BP55884 814 aaKnown RBP8.95□□□□□ -0.98
RFFL-203ENST00000413582 NUP107P57740 925 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 MLF1P58340 268 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 ABATP80404 500 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 TAP2Q03519 686 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 NSDHLQ15738 373 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 ERCC6LQ2NKX8 1250 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 EMC4Q5J8M3 183 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 TMEM214Q6NUQ4 689 aaKnown RBP8.95□□□□□ -0.98
RFFL-203ENST00000413582 PPP1R21Q6ZMI0 780 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 PRUNE1Q86TP1 453 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 PDSS2Q86YH6 399 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 IFT20Q8IY31 132 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 CLYBLQ8N0X4 340 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 MPP5Q8N3R9 675 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 BBOF1Q8ND07 529 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 LRRN4CLQ8ND94 238 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 ZCCHC10Q8TBK6 192 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 MCOLN3Q8TDD5 553 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 ZNF480Q8WV37 535 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 TMEM125Q96AQ2 219 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 FAM136AQ96C01 138 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 BIRC8Q96P09 236 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 ALPK1Q96QP1 1244 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 PKP4Q99569 1192 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 MACROD1Q9BQ69 325 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 ERP44Q9BS26 406 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 FAM114A2Q9NRY5 505 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 LANCL2Q9NS86 450 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 RAB21Q9UL25 225 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 PLEKHA6Q9Y2H5 1048 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 KLF13Q9Y2Y9 288 aaPredicted RBP8.95□□□□□ -0.98
RFFL-203ENST00000413582 MPDZO75970 2070 aa8.95□□□□□ -0.98
RFFL-203ENST00000413582 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.94□□□□□ -0.98
RFFL-203ENST00000413582 ZNF839A8K0R7 811 aa8.94□□□□□ -0.98
RFFL-203ENST00000413582 H7BY64 318 aa8.94□□□□□ -0.98
RFFL-203ENST00000413582 PRMT3O60678 531 aa8.94□□□□□ -0.98
RFFL-203ENST00000413582 IFNB1P01574 187 aa8.94□□□□□ -0.98
RFFL-203ENST00000413582 CATP04040 527 aaKnown RBP8.94□□□□□ -0.98
RFFL-203ENST00000413582 ZSCAN5DPP0CG00 497 aa8.94□□□□□ -0.98
RFFL-203ENST00000413582 ARNTP27540 789 aa8.94□□□□□ -0.98
RFFL-203ENST00000413582 HSD17B2P37059 387 aa8.94□□□□□ -0.98
RFFL-203ENST00000413582 HLCSP50747 726 aa8.94□□□□□ -0.98
RFFL-203ENST00000413582 NR0B1P51843 470 aaKnown RBP8.94□□□□□ -0.98
RFFL-203ENST00000413582 DLX5P56178 289 aa8.94□□□□□ -0.98
RFFL-203ENST00000413582 OR4D2P58180 307 aa8.94□□□□□ -0.98
RFFL-203ENST00000413582 ADAM8P78325 824 aa8.94□□□□□ -0.98
RFFL-203ENST00000413582 MPP1Q00013 466 aa8.94□□□□□ -0.98
RFFL-203ENST00000413582 CAV1Q03135 178 aa8.94□□□□□ -0.98
RFFL-203ENST00000413582 LTBQ06643 244 aa8.94□□□□□ -0.98
RFFL-203ENST00000413582 ACTN3Q08043 901 aaPredicted RBP8.94□□□□□ -0.98
RFFL-203ENST00000413582 CUL1Q13616 776 aa8.94□□□□□ -0.98
RFFL-203ENST00000413582 KCNJ11Q14654 390 aa8.94□□□□□ -0.98
RFFL-203ENST00000413582 PPP1R7Q15435 360 aa8.94□□□□□ -0.98
RFFL-203ENST00000413582 KCTD19Q17RG1 926 aaPredicted RBP8.94□□□□□ -0.98
RFFL-203ENST00000413582 DUPD1Q68J44 220 aa8.94□□□□□ -0.98
RFFL-203ENST00000413582 ARHGAP11AQ6P4F7 1023 aa8.94□□□□□ -0.98
RFFL-203ENST00000413582 GSTA5Q7RTV2 222 aa8.94□□□□□ -0.98
RFFL-203ENST00000413582 SULF2Q8IWU5 870 aa8.94□□□□□ -0.98
RFFL-203ENST00000413582 LRRC56Q8IYG6 542 aaPredicted RBP8.94□□□□□ -0.98
RFFL-203ENST00000413582 ARMC10Q8N2F6 343 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms