RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 APLFQ8IW19 511 aaPredicted RBP10.34□□□□□ -0.75
CHMP3-205ENST00000409810 AFAP1L2Q8N4X5 818 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 DTWD1Q8N5C7 304 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 AMER3Q8N944 861 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 SRFBP1Q8NEF9 429 aaKnown RBP10.34□□□□□ -0.75
CHMP3-205ENST00000409810 OR9A4Q8NGU2 314 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 CREB3L4Q8TEY5 395 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 PPP4R1Q8TF05 950 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 GAL3ST3Q96A11 431 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 CCDC126Q96EE4 140 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 MOCOSQ96EN8 888 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 FAR2Q96K12 515 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 TGIF2Q9GZN2 237 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 REXO4Q9GZR2 422 aaKnown RBP10.34□□□□□ -0.75
CHMP3-205ENST00000409810 RHBGQ9H310 441 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 IPPKQ9H8X2 491 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 ACTR8Q9H981 624 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 CLK4Q9HAZ1 481 aaKnown RBP10.34□□□□□ -0.75
CHMP3-205ENST00000409810 ACSS2Q9NR19 701 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 TMEM216Q9P0N5 145 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 TUBD1Q9UJT1 453 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 MID2Q9UJV3 735 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 MRPS2Q9Y399 296 aaKnown RBP10.34□□□□□ -0.75
CHMP3-205ENST00000409810 NAALAD2Q9Y3Q0 740 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 PCDHGA11Q9Y5H2 935 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 KCNMB2Q9Y691 235 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 CHD6Q8TD26 2715 aa10.34□□□□□ -0.75
CHMP3-205ENST00000409810 A0A1W2PPM1 405 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 ARGFXA6NJG6 315 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 A8MT66 165 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 SGK494L7N484 410 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 COPEO14579 308 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 KLHL41O60662 606 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 GALR3O60755 368 aaPredicted RBP10.33□□□□□ -0.76
CHMP3-205ENST00000409810 CLDN9O95484 217 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 HEXBP07686 556 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 UMODP07911 640 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 RPS17P08708 135 aaKnown RBP10.33□□□□□ -0.76
CHMP3-205ENST00000409810 PCNAP12004 261 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 CD22P20273 847 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 ATP5F1P24539 256 aaPredicted RBP10.33□□□□□ -0.76
CHMP3-205ENST00000409810 CRHR1P34998 444 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 NAA20P61599 178 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 HERVK_113P63132 956 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 MAT1AQ00266 395 aaKnown RBP10.33□□□□□ -0.76
CHMP3-205ENST00000409810 KLC1Q07866 573 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 ATP1A4Q13733 1029 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 LINC00303Q3SY05 128 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 DEFB134Q4QY38 66 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 VWA2Q5GFL6 755 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 FAM69BQ5VUD6 431 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 CLEC1AQ8NC01 280 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 OR51Q1Q8NH59 317 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 OR2W6PQ8NHA6 318 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 UTP15Q8TED0 518 aaKnown RBP10.33□□□□□ -0.76
CHMP3-205ENST00000409810 SLC39A7Q92504 469 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 OR1F2PQ96R84 312 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 CENPKQ9BS16 269 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 C1QTNF3Q9BXJ4 246 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 ERVK-6Q9BXR3 956 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 ROGDIQ9GZN7 287 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 IQCGQ9H095 443 aaKnown RBP10.33□□□□□ -0.76
CHMP3-205ENST00000409810 ING2Q9H160 280 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 NOL11Q9H8H0 719 aaKnown RBP10.33□□□□□ -0.76
CHMP3-205ENST00000409810 HCN3Q9P1Z3 774 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 C3orf18Q9UK00 162 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 GRID1Q9ULK0 1009 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 PLAAQ9Y263 795 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 STK38LQ9Y2H1 464 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 TSC22D4Q9Y3Q8 395 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 DOCK10Q96BY6 2186 aa10.33□□□□□ -0.76
CHMP3-205ENST00000409810 LRIT2A6NDA9 550 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 ZNF860A6NHJ4 632 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 IDSB3KWA1 339 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 MKRN2OSH3BPM6 223 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 AGPSO00116 658 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 PSMD12O00232 456 aaPredicted RBP10.32□□□□□ -0.76
CHMP3-205ENST00000409810 FFAR3O14843 346 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 GPR42O15529 346 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 ERI3O43414 337 aaKnown RBP10.32□□□□□ -0.76
CHMP3-205ENST00000409810 PRAMEF4O60810 478 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 RDH16O75452 317 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 BMP10O95393 424 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 OTCP00480 354 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 FAM87AP0C7U9 286 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 MYL2P10916 166 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 KRT4P19013 534 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 JAK1P23458 1154 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 XCR1P46094 333 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 EMP2P54851 167 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 RAB8AP61006 207 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 HYAL2Q12891 473 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 KCNAB2Q13303 367 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 SYT16Q17RD7 645 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 TUBB8Q3ZCM7 444 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 C10orf62Q5T681 223 aaPredicted RBP10.32□□□□□ -0.76
CHMP3-205ENST00000409810 MFSD4BQ5TF39 518 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 PRAMEF9Q5VWM5 478 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 SHISA6Q6ZSJ9 500 aa10.32□□□□□ -0.76
CHMP3-205ENST00000409810 PRSS41Q7RTY9 318 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms