RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 POU2F3Q9UKI9 436 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 TSPAN16Q9UKR8 245 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 CDH9Q9ULB4 789 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 KIAA1257Q9ULG3 409 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 DLGAP4Q9Y2H0 992 aa4.1□□□□□ -1.75
CLK1-203ENST00000409769 PRG3Q9Y2Y8 225 aaPredicted RBP4.1□□□□□ -1.75
CLK1-203ENST00000409769 SF3B1O75533 1304 aaKnown RBP eCLIP4.1□□□□□ -1.75
CLK1-203ENST00000409769 A0A1W2PP11 408 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 MYBPHLA2RUH7 354 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 CTAGE9A4FU28 777 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 C5orf67F2Z3F1 127 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 MAP2K7O14733 419 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 HS3ST1O14792 307 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 ZSCAN12O43309 604 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 MED7O43513 233 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 TRAPPC3O43617 180 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 ZNF500O60304 480 aaPredicted RBP4.09□□□□□ -1.75
CLK1-203ENST00000409769 RTN2O75298 545 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 TADA2AO75478 443 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 BEST1O76090 585 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 CTAGE8P0CG41 777 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 CDH1P12830 882 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 CCDC130P13994 396 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 MYOD1P15172 320 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 ZNF23P17027 643 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 AMD1P17707 334 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 GM2AP17900 193 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 ACAT1P24752 427 aaKnown RBP4.09□□□□□ -1.75
CLK1-203ENST00000409769 NFKBIAP25963 317 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 ARL3P36405 182 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 GALCP54803 685 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 CLDN20P56880 219 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 KRT83P78385 493 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 SPA17Q15506 151 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 GOLGA7BQ2TAP0 167 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 PTPN20Q4JDL3 420 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 ZNF805Q5CZA5 627 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 CCDC122Q5T0U0 273 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 FAM109BQ6ICB4 259 aaPredicted RBP4.09□□□□□ -1.75
CLK1-203ENST00000409769 SLC8B1Q6J4K2 584 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 PPP1R2P3Q6NXS1 205 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 CLEC20AQ6ZU45 233 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 MAATS1Q7Z4T9 603 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 SMIM29Q86T20 159 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 TBC1D1Q86TI0 1168 aaPredicted RBP4.09□□□□□ -1.75
CLK1-203ENST00000409769 VPS36Q86VN1 386 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 DNAAF5Q86Y56 855 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 CTAGE4Q8IX94 777 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 ODF3L1Q8IXM7 274 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 MCOLN2Q8IZK6 566 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 C17orf53Q8N3J3 647 aaPredicted RBP4.09□□□□□ -1.75
CLK1-203ENST00000409769 ANKRD52Q8NB46 1076 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 SLC38A9Q8NBW4 561 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 C1orf131Q8NDD1 294 aaKnown RBP4.09□□□□□ -1.75
CLK1-203ENST00000409769 CD101Q93033 1021 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 SECISBP2LQ93073 1101 aaKnown RBP4.09□□□□□ -1.75
CLK1-203ENST00000409769 MYLPFQ96A32 169 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 SKA1Q96BD8 255 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 PCED1BQ96HM7 432 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 PGAM5Q96HS1 289 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 C1orf74Q96LT6 269 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 TREX2Q9BQ50 279 aaPredicted RBP4.09□□□□□ -1.75
CLK1-203ENST00000409769 SYT15Q9BQS2 421 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 DUSP16Q9BY84 665 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 MTIF3Q9H2K0 278 aaKnown RBP4.09□□□□□ -1.75
CLK1-203ENST00000409769 SNX25Q9H3E2 840 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 CSNK1G1Q9HCP0 422 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 MTRRQ9UBK8 725 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 TRIM10Q9UDY6 481 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 FBXL2Q9UKC9 423 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 GTF3C4Q9UKN8 822 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 KCNS2Q9ULS6 477 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 TFR2Q9UP52 801 aa4.09□□□□□ -1.75
CLK1-203ENST00000409769 KIF26BQ2KJY2 2108 aa4.09□□□□□ -1.76
CLK1-203ENST00000409769 C1orf226A1L170 272 aa4.08□□□□□ -1.76
CLK1-203ENST00000409769 MTMR11A4FU01 709 aa4.08□□□□□ -1.76
CLK1-203ENST00000409769 CDRT15L2A8MXV6 281 aa4.08□□□□□ -1.76
CLK1-203ENST00000409769 HHLA1C9JL84 531 aa4.08□□□□□ -1.76
CLK1-203ENST00000409769 M0QYV0 167 aa4.08□□□□□ -1.76
CLK1-203ENST00000409769 CLDN5O00501 218 aa4.08□□□□□ -1.76
CLK1-203ENST00000409769 XPO1O14980 1071 aaKnown RBP4.08□□□□□ -1.76
CLK1-203ENST00000409769 ANKRD28O15084 1053 aa4.08□□□□□ -1.76
CLK1-203ENST00000409769 ADAM12O43184 909 aa4.08□□□□□ -1.76
CLK1-203ENST00000409769 OR2C1O95371 312 aa4.08□□□□□ -1.76
CLK1-203ENST00000409769 HIST1H2ABP04908 130 aa4.08□□□□□ -1.76
CLK1-203ENST00000409769 H2AFZP0C0S5 128 aa4.08□□□□□ -1.76
CLK1-203ENST00000409769 OR4Q2P0C623 313 aa4.08□□□□□ -1.76
CLK1-203ENST00000409769 MYBL1P10243 752 aa4.08□□□□□ -1.76
CLK1-203ENST00000409769 ACADMP11310 421 aa4.08□□□□□ -1.76
CLK1-203ENST00000409769 MYOGP15173 224 aa4.08□□□□□ -1.76
CLK1-203ENST00000409769 ITGA2P17301 1181 aa4.08□□□□□ -1.76
CLK1-203ENST00000409769 HIST1H2ADP20671 130 aa4.08□□□□□ -1.76
CLK1-203ENST00000409769 CAPN3P20807 821 aa4.08□□□□□ -1.76
CLK1-203ENST00000409769 ADORA2BP29275 332 aa4.08□□□□□ -1.76
CLK1-203ENST00000409769 MAGEA1P43355 309 aa4.08□□□□□ -1.76
CLK1-203ENST00000409769 NSFP46459 744 aaKnown RBP4.08□□□□□ -1.76
CLK1-203ENST00000409769 HADHBP55084 474 aaKnown RBP4.08□□□□□ -1.76
CLK1-203ENST00000409769 TSPY1Q01534 308 aa4.08□□□□□ -1.76
CLK1-203ENST00000409769 RUNX1T1Q06455 604 aa4.08□□□□□ -1.76
CLK1-203ENST00000409769 ARL16Q0P5N6 197 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms