RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 CTDNEP1O95476 244 aa13.46□□□□□ -0.26
AFF3-202ENST00000409236 RNF4P78317 190 aa13.46□□□□□ -0.26
AFF3-202ENST00000409236 NIPAL4Q0D2K0 466 aa13.46□□□□□ -0.26
AFF3-202ENST00000409236 PTPRRQ15256 657 aa13.46□□□□□ -0.26
AFF3-202ENST00000409236 TMEM119Q4V9L6 283 aa13.46□□□□□ -0.26
AFF3-202ENST00000409236 DCLRE1AQ6PJP8 1040 aa13.46□□□□□ -0.26
AFF3-202ENST00000409236 CMC1Q7Z7K0 106 aa13.46□□□□□ -0.26
AFF3-202ENST00000409236 CMTM1Q8IZ96 169 aa13.46□□□□□ -0.26
AFF3-202ENST00000409236 RGMAQ96B86 450 aa13.46□□□□□ -0.26
AFF3-202ENST00000409236 KIAA1522Q9P206 1035 aaPredicted RBP13.46□□□□□ -0.26
AFF3-202ENST00000409236 ERVW-1Q9UQF0 538 aa13.46□□□□□ -0.26
AFF3-202ENST00000409236 UBBP0CG47 229 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 UBCP0CG48 685 aaKnown RBP13.45□□□□□ -0.26
AFF3-202ENST00000409236 ALAS2P22557 587 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 RPS27AP62979 156 aaKnown RBP13.45□□□□□ -0.26
AFF3-202ENST00000409236 UBA52P62987 128 aaKnown RBP13.45□□□□□ -0.26
AFF3-202ENST00000409236 SLC19A3Q9BZV2 496 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 WDR6Q9NNW5 1121 aaKnown RBP13.45□□□□□ -0.26
AFF3-202ENST00000409236 ASB4Q9Y574 426 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 CYB5BO43169 146 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 PPATQ06203 517 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 HLFQ16534 295 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 ZC3H12AQ5D1E8 599 aaKnown RBP13.45□□□□□ -0.26
AFF3-202ENST00000409236 ATG9BQ674R7 924 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 ZNF781Q8N8C0 355 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 OR13C3Q8NGS6 347 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 EFCAB11Q9BUY7 163 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 CCL15-CCL14A0A0B4J2E2 113 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 NR4A2P43354 598 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 CLRN1P58418 232 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 CCL15Q16663 113 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 OR10R2Q8NGX6 335 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 HOXB13Q92826 284 aaPredicted RBP13.45□□□□□ -0.26
AFF3-202ENST00000409236 J3QRK9 145 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 IRF6O14896 467 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 RAB7AP51149 207 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 FBXL8Q96CD0 374 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 LGMNQ99538 433 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 PCDHB9Q9Y5E1 797 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 H3BSA7 217 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 EPHB6O15197 1021 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 SEC14L2O76054 403 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 MYCLP1P12525 358 aaPredicted RBP13.45□□□□□ -0.26
AFF3-202ENST00000409236 MTPNP58546 118 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 THEM6Q8WUY1 208 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 ZMAT5Q9UDW3 170 aaKnown RBP13.45□□□□□ -0.26
AFF3-202ENST00000409236 IGKV5-2P06315 115 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 IDSP22304 550 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 LRP8Q14114 963 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 ANKRD22Q5VYY1 191 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.45□□□□□ -0.26
AFF3-202ENST00000409236 TMBIM1Q969X1 311 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 A0A1W2PQ45 241 aaPredicted RBP13.45□□□□□ -0.26
AFF3-202ENST00000409236 A0A1W2PQY0 241 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 GALEQ14376 348 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 MINDY4Q4G0A6 757 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 SLC39A4Q6P5W5 647 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 DNAJC22Q8N4W6 341 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 AVL9Q8NBF6 648 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 DAZAP1Q96EP5 407 aaKnown RBP13.45□□□□□ -0.26
AFF3-202ENST00000409236 SYT3Q9BQG1 590 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 MRPS30Q9NP92 439 aaKnown RBP13.45□□□□□ -0.26
AFF3-202ENST00000409236 GRXCR2A6NFK2 248 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 VIPP01282 170 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 ZSWIM9Q86XI8 627 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 SLC22A17Q8WUG5 538 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 TSPAN10Q9H1Z9 355 aaPredicted RBP13.45□□□□□ -0.26
AFF3-202ENST00000409236 EXTL2Q9UBQ6 330 aa13.45□□□□□ -0.26
AFF3-202ENST00000409236 CTNNB1P35222 781 aa13.44□□□□□ -0.26
AFF3-202ENST00000409236 RHBDF2Q6PJF5 856 aa13.44□□□□□ -0.26
AFF3-202ENST00000409236 CMIPQ8IY22 773 aa13.44□□□□□ -0.26
AFF3-202ENST00000409236 ZNF611Q8N823 705 aa13.44□□□□□ -0.26
AFF3-202ENST00000409236 ARHGEF17Q96PE2 2063 aaPredicted RBP13.44□□□□□ -0.26
AFF3-202ENST00000409236 ST3GAL3Q11203 375 aa13.44□□□□□ -0.26
AFF3-202ENST00000409236 ERN2Q76MJ5 926 aaKnown RBP13.44□□□□□ -0.26
AFF3-202ENST00000409236 DENND1AQ8TEH3 1009 aa13.44□□□□□ -0.26
AFF3-202ENST00000409236 OSMRQ99650 979 aa13.44□□□□□ -0.26
AFF3-202ENST00000409236 MRPL17Q9NRX2 175 aaKnown RBP13.44□□□□□ -0.26
AFF3-202ENST00000409236 PCDHB11Q9Y5F2 797 aa13.44□□□□□ -0.26
AFF3-202ENST00000409236 SLC29A4Q7RTT9 530 aa13.44□□□□□ -0.26
AFF3-202ENST00000409236 APMAPQ9HDC9 416 aa13.44□□□□□ -0.26
AFF3-202ENST00000409236 FZD3Q9NPG1 666 aa13.44□□□□□ -0.26
AFF3-202ENST00000409236 TMEM248Q9NWD8 314 aa13.44□□□□□ -0.26
AFF3-202ENST00000409236 ZNF850A8MQ14 1090 aa13.44□□□□□ -0.26
AFF3-202ENST00000409236 TOR1AO14656 332 aa13.44□□□□□ -0.26
AFF3-202ENST00000409236 PRAF2O60831 178 aa13.44□□□□□ -0.26
AFF3-202ENST00000409236 HEXBP07686 556 aa13.44□□□□□ -0.26
AFF3-202ENST00000409236 OR5T1Q8NG75 326 aa13.44□□□□□ -0.26
AFF3-202ENST00000409236 TRUB1Q8WWH5 349 aaKnown RBP13.44□□□□□ -0.26
AFF3-202ENST00000409236 BTN2A3PQ96KV6 586 aa13.44□□□□□ -0.26
AFF3-202ENST00000409236 PTCH2Q9Y6C5 1203 aa13.44□□□□□ -0.26
AFF3-202ENST00000409236 IQGAP1P46940 1657 aa13.44□□□□□ -0.26
AFF3-202ENST00000409236 SERPINA7P05543 415 aa13.44□□□□□ -0.26
AFF3-202ENST00000409236 DSTNP60981 165 aa13.44□□□□□ -0.26
AFF3-202ENST00000409236 NUDT13Q86X67 352 aa13.44□□□□□ -0.26
AFF3-202ENST00000409236 PYURFQ96I23 114 aa13.44□□□□□ -0.26
AFF3-202ENST00000409236 DNAJC5Q9H3Z4 198 aa13.44□□□□□ -0.26
AFF3-202ENST00000409236 CD300AQ9UGN4 299 aa13.44□□□□□ -0.26
AFF3-202ENST00000409236 LRP5LA4QPB2 252 aa13.44□□□□□ -0.26
AFF3-202ENST00000409236 CSF2P04141 144 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms