RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 ARGFXA6NJG6 315 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 E7EQ34 232 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 NDUFS3O75489 264 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 WISP1O95388 367 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 ETS2P15036 469 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 RPS3P23396 243 aaKnown RBP eCLIP9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 PSMB5P28074 263 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 GRIA3P42263 894 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 RAB28P51157 221 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 PLTPP55058 493 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 ITGA1P56199 1179 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 RPS15P62841 145 aaKnown RBP9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 CYP1B1Q16678 543 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 KYNUQ16719 465 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 TYSND1Q2T9J0 566 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 IGSF11Q5DX21 431 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 FCRL6Q6DN72 434 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 CASC4Q6P4E1 433 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 CCDC137Q6PK04 289 aaKnown RBP9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 ATG14Q6ZNE5 492 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 CENPUQ71F23 418 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 DENND6AQ8IWF6 608 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 DNAJC22Q8N4W6 341 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 OR10Z1Q8NGY1 313 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 ADAMTS17Q8TE56 1095 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 DENND1AQ8TEH3 1009 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 CCDC138Q96M89 665 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 SERPINB12Q96P63 405 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 ALPK1Q96QP1 1244 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 ZNF184Q99676 751 aaPredicted RBP9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 CCDC77Q9BR77 488 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 GPR87Q9BY21 358 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 SIRT5Q9NXA8 310 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 DHCR7Q9UBM7 475 aaKnown RBP9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 GNPTGQ9UJJ9 305 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 TUBD1Q9UJT1 453 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 CENPEQ02224 2701 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 USP9YO00507 2555 aaPredicted RBP9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 MASP2O00187 686 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 RASGRF2O14827 1237 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 BANF1O75531 89 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 OR2B3O76000 313 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 C1orf105O95561 183 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 APOA4P06727 396 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 OCM2P0CE71 109 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 OCMP0CE72 109 aaPredicted RBP9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 ITGAXP20702 1163 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 ADSLP30566 484 aaPredicted RBP9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 PTGIRP43119 386 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 SLC34A1Q06495 639 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 CUL1Q13616 776 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 FASTKQ14296 549 aaKnown RBP9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 IGFBP7Q16270 282 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 KIAA0930Q6ICG6 404 aaPredicted RBP9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 ZNF704Q6ZNC4 412 aaPredicted RBP9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 ACAD11Q709F0 780 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 OTOAQ7RTW8 1153 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 CILP2Q8IUL8 1156 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 DCUN1D3Q8IWE4 304 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 GSPT2Q8IYD1 628 aaKnown RBP9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 ZNF655Q8N720 491 aaPredicted RBP9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 CEP70Q8NHQ1 597 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 SLC22A8Q8TCC7 542 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 SKA2Q8WVK7 121 aaPredicted RBP9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 ZNF669Q96BR6 464 aaPredicted RBP9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 NMD3Q96D46 503 aaKnown RBP9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 TCTN2Q96GX1 697 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 LRFN5Q96NI6 719 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 SYNPO2LQ9H987 977 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 FBXO6Q9NRD1 293 aaPredicted RBP9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 TCFL5Q9UL49 500 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 SNX7Q9UNH6 387 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 MED16Q9Y2X0 877 aa9.26□□□□□ -0.93
NIF3L1-202ENST00000409020 SEC16AO15027 2179 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 TRAV6A0A075B6T7 132 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 ZCWPW2A0A1B0GU75 182 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 OR6C65A6NJZ3 312 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 PGRMC1O00264 195 aaKnown RBP9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 PRICKLE3O43900 615 aaPredicted RBP9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 KLHL41O60662 606 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 RFPL1O75677 317 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 KLF7O75840 302 aaPredicted RBP9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 ALX3O95076 343 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 ECDO95905 644 aaPredicted RBP9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 KRT20P35900 424 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 MAGEA3P43357 314 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 POLR2GP62487 172 aaKnown RBP eCLIP9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 CDK16Q00536 496 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 CD83Q01151 205 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 CTBP1Q13363 440 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 GBX1Q14549 363 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 KIR2DS3Q14952 304 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 NCF4Q15080 339 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 KCNJ8Q15842 424 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 SLC5A12Q1EHB4 618 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 ANKRD20A4Q4UJ75 823 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 ACSBG2Q5FVE4 666 aa9.25□□□□□ -0.93
NIF3L1-202ENST00000409020 SPDYAQ5MJ70 313 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms