RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 LAPTM4BQ86VI4 370 aa13.55□□□□□ -0.24
DUSP28-202ENST00000405954 OR7D4Q8NG98 312 aa13.55□□□□□ -0.24
DUSP28-202ENST00000405954 OR4D10Q8NGI6 311 aa13.55□□□□□ -0.24
DUSP28-202ENST00000405954 TMEM174Q8WUU8 243 aa13.55□□□□□ -0.24
DUSP28-202ENST00000405954 GORASP2Q9H8Y8 452 aa13.55□□□□□ -0.24
DUSP28-202ENST00000405954 TBC1D17Q9HA65 648 aa13.55□□□□□ -0.24
DUSP28-202ENST00000405954 ELF5Q9UKW6 265 aaPredicted RBP13.55□□□□□ -0.24
DUSP28-202ENST00000405954 TRAPPC4Q9Y296 219 aa13.55□□□□□ -0.24
DUSP28-202ENST00000405954 COL4A5P29400 1685 aa13.55□□□□□ -0.24
DUSP28-202ENST00000405954 METTL21EPA6NDL7 271 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 NPEPPSL1A6NEC2 478 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 DISC1C4P0D8 188 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 SIGLEC5O15389 551 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 STBD1O95210 358 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 WDPCPO95876 746 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 CAPZA1P52907 286 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 MAXP61244 160 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 SIGLEC14Q08ET2 396 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 IRF5Q13568 498 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 LY6KQ17RY6 165 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 USP39Q53GS9 565 aaKnown RBP13.54□□□□□ -0.24
DUSP28-202ENST00000405954 MZT2AQ6P582 158 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 ZPBP2Q6X784 338 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 OR10G2Q8NGC3 310 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 OR8J3Q8NGG0 315 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 ZFP3Q96NJ6 502 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 TSNAXQ99598 290 aaKnown RBP13.54□□□□□ -0.24
DUSP28-202ENST00000405954 PITHD1Q9GZP4 211 aaPredicted RBP13.54□□□□□ -0.24
DUSP28-202ENST00000405954 TAS2R3Q9NYW6 316 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 DNAJC27Q9NZQ0 273 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 GOLGA4Q13439 2230 aaKnown RBP13.54□□□□□ -0.24
DUSP28-202ENST00000405954 A0A1B0GVM2 712 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 ASPDHA6ND91 283 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 ALDOBP05062 364 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 STAG3L1P0CL83 205 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 ZP3P21754 424 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 UBA1P22314 1058 aaKnown RBP13.54□□□□□ -0.24
DUSP28-202ENST00000405954 STARP49675 285 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 CDKN2DP55273 166 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 KANK2Q63ZY3 851 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 ELP2Q6IA86 826 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 SLC16A13Q7RTY0 426 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 OXR1Q8N573 874 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 PTP4A1Q93096 173 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 UPRTQ96BW1 309 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 HSH2DQ96JZ2 352 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 NPAS1Q99742 590 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 AGO1Q9UL18 857 aaKnown RBP13.54□□□□□ -0.24
DUSP28-202ENST00000405954 UBQLN1Q9UMX0 589 aaKnown RBP13.54□□□□□ -0.24
DUSP28-202ENST00000405954 PADI2Q9Y2J8 665 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 TEX13CA0A0J9YWL9 993 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 LRRC37AA6NMS7 1700 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 ARHGEF33A8MVX0 844 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 MRPS14O60783 128 aaKnown RBP13.54□□□□□ -0.24
DUSP28-202ENST00000405954 AOC2O75106 756 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 GATBO75879 557 aaKnown RBP13.54□□□□□ -0.24
DUSP28-202ENST00000405954 ALPIP09923 528 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 CXCL9Q07325 125 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 TMEM132BQ14DG7 1078 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 CRTC1Q6UUV9 634 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 VSIG10LQ86VR7 867 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 GPSM1Q86YR5 675 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 LIX1Q8N485 282 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 C2CD4AQ8NCU7 369 aaPredicted RBP13.54□□□□□ -0.24
DUSP28-202ENST00000405954 ZNF548Q8NEK5 533 aaPredicted RBP13.54□□□□□ -0.24
DUSP28-202ENST00000405954 EDEM1Q92611 657 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 CRB3Q9BUF7 120 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 SLC29A3Q9BZD2 475 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 OR51B5Q9H339 312 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 OR51J1Q9H342 316 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 WDCPQ9H6R7 721 aa13.54□□□□□ -0.24
DUSP28-202ENST00000405954 ELAC1Q9H777 363 aaKnown RBP13.54□□□□□ -0.24
DUSP28-202ENST00000405954 HCN1O60741 890 aa13.53□□□□□ -0.24
DUSP28-202ENST00000405954 DRD5P21918 477 aa13.53□□□□□ -0.24
DUSP28-202ENST00000405954 ZCCHC12Q6PEW1 402 aa13.53□□□□□ -0.24
DUSP28-202ENST00000405954 C11orf88Q6PI97 169 aa13.53□□□□□ -0.24
DUSP28-202ENST00000405954 PDZD3Q86UT5 571 aa13.53□□□□□ -0.24
DUSP28-202ENST00000405954 PGBD3Q8N328 593 aa13.53□□□□□ -0.24
DUSP28-202ENST00000405954 UBXN10Q96LJ8 280 aa13.53□□□□□ -0.24
DUSP28-202ENST00000405954 PANX1Q96RD7 426 aa13.53□□□□□ -0.24
DUSP28-202ENST00000405954 PIP5K1AQ99755 562 aa13.53□□□□□ -0.24
DUSP28-202ENST00000405954 NT5MQ9NPB1 228 aa13.53□□□□□ -0.24
DUSP28-202ENST00000405954 TAS2R13Q9NYV9 303 aa13.53□□□□□ -0.24
DUSP28-202ENST00000405954 PGAP2Q9UHJ9 254 aa13.53□□□□□ -0.24
DUSP28-202ENST00000405954 LRFN2Q9ULH4 789 aa13.53□□□□□ -0.24
DUSP28-202ENST00000405954 TNPO3Q9Y5L0 923 aaKnown RBP13.53□□□□□ -0.24
DUSP28-202ENST00000405954 FKBP7Q9Y680 259 aa13.53□□□□□ -0.24
DUSP28-202ENST00000405954 V9GYH0 126 aa13.53□□□□□ -0.24
DUSP28-202ENST00000405954 SUV39H1O43463 412 aa13.53□□□□□ -0.24
DUSP28-202ENST00000405954 TLR5O60602 858 aa13.53□□□□□ -0.24
DUSP28-202ENST00000405954 SLC43A1O75387 559 aa13.53□□□□□ -0.24
DUSP28-202ENST00000405954 HOXC6P09630 235 aa13.53□□□□□ -0.24
DUSP28-202ENST00000405954 DARSP14868 501 aaKnown RBP13.53□□□□□ -0.24
DUSP28-202ENST00000405954 MATKP42679 507 aa13.53□□□□□ -0.24
DUSP28-202ENST00000405954 PURAQ00577 322 aaKnown RBP13.53□□□□□ -0.24
DUSP28-202ENST00000405954 SMCO1Q147U7 214 aa13.53□□□□□ -0.24
DUSP28-202ENST00000405954 NTRK2Q16620 822 aa13.53□□□□□ -0.24
DUSP28-202ENST00000405954 GPR139Q6DWJ6 353 aa13.53□□□□□ -0.24
DUSP28-202ENST00000405954 WASH2PQ6VEQ5 465 aa13.53□□□□□ -0.24
DUSP28-202ENST00000405954 CYHR1Q6ZMK1 362 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms