RNA–Protein interactions for RNA: ENST00000402259.5

HDAC11-202, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-202ENST00000402259 FAM198BQ6UWH4 519 aa16.53■□□□□ 0.24
HDAC11-202ENST00000402259 LRRC69Q6ZNQ3 347 aa16.53■□□□□ 0.24
HDAC11-202ENST00000402259 SYVN1Q86TM6 617 aa16.53■□□□□ 0.24
HDAC11-202ENST00000402259 SRFBP1Q8NEF9 429 aaKnown RBP16.53■□□□□ 0.24
HDAC11-202ENST00000402259 OR6Y1Q8NGX8 325 aa16.53■□□□□ 0.24
HDAC11-202ENST00000402259 HUS1BQ8NHY5 278 aa16.53■□□□□ 0.24
HDAC11-202ENST00000402259 UTP15Q8TED0 518 aaKnown RBP16.53■□□□□ 0.24
HDAC11-202ENST00000402259 CT55Q8WUE5 264 aa16.53■□□□□ 0.24
HDAC11-202ENST00000402259 GAL3ST3Q96A11 431 aa16.53■□□□□ 0.24
HDAC11-202ENST00000402259 CMTM7Q96FZ5 175 aa16.53■□□□□ 0.24
HDAC11-202ENST00000402259 SMIM10Q96HG1 83 aa16.53■□□□□ 0.24
HDAC11-202ENST00000402259 FRG2BQ96QU4 278 aa16.53■□□□□ 0.24
HDAC11-202ENST00000402259 MACROD1Q9BQ69 325 aa16.53■□□□□ 0.24
HDAC11-202ENST00000402259 MECRQ9BV79 373 aa16.53■□□□□ 0.24
HDAC11-202ENST00000402259 MS4A8Q9BY19 250 aa16.53■□□□□ 0.24
HDAC11-202ENST00000402259 SLC26A1Q9H2B4 701 aa16.53■□□□□ 0.24
HDAC11-202ENST00000402259 AKIRIN1Q9H9L7 192 aaPredicted RBP16.53■□□□□ 0.24
HDAC11-202ENST00000402259 ANKHQ9HCJ1 492 aa16.53■□□□□ 0.24
HDAC11-202ENST00000402259 ZNF304Q9HCX3 659 aa16.53■□□□□ 0.24
HDAC11-202ENST00000402259 CROTQ9UKG9 612 aa16.53■□□□□ 0.24
HDAC11-202ENST00000402259 SNX6Q9UNH7 406 aa16.53■□□□□ 0.24
HDAC11-202ENST00000402259 MRPS2Q9Y399 296 aaKnown RBP16.53■□□□□ 0.24
HDAC11-202ENST00000402259 ANKRD11Q6UB99 2663 aaPredicted RBP16.53■□□□□ 0.24
HDAC11-202ENST00000402259 LOC101059948A0A1B0GTJ6 334 aa16.52■□□□□ 0.24
HDAC11-202ENST00000402259 ATP8B1O43520 1251 aa16.52■□□□□ 0.24
HDAC11-202ENST00000402259 OR4F21O95013 312 aa16.52■□□□□ 0.24
HDAC11-202ENST00000402259 STATHP02808 62 aa16.52■□□□□ 0.24
HDAC11-202ENST00000402259 TCN2P20062 427 aa16.52■□□□□ 0.24
HDAC11-202ENST00000402259 DLSTP36957 453 aa16.52■□□□□ 0.24
HDAC11-202ENST00000402259 TGM3Q08188 693 aa16.52■□□□□ 0.24
HDAC11-202ENST00000402259 IFT88Q13099 833 aa16.52■□□□□ 0.24
HDAC11-202ENST00000402259 DNASE1L3Q13609 305 aa16.52■□□□□ 0.24
HDAC11-202ENST00000402259 TMEM35AQ53FP2 167 aa16.52■□□□□ 0.24
HDAC11-202ENST00000402259 TOR1AIP1Q5JTV8 583 aa16.52■□□□□ 0.24
HDAC11-202ENST00000402259 ADNP2Q6IQ32 1131 aa16.52■□□□□ 0.24
HDAC11-202ENST00000402259 MRPL14Q6P1L8 145 aaKnown RBP16.52■□□□□ 0.24
HDAC11-202ENST00000402259 CHSY3Q70JA7 882 aa16.52■□□□□ 0.24
HDAC11-202ENST00000402259 NUDCD3Q8IVD9 361 aa16.52■□□□□ 0.24
HDAC11-202ENST00000402259 SPACA3Q8IXA5 215 aa16.52■□□□□ 0.24
HDAC11-202ENST00000402259 OR2L5Q8NG80 312 aa16.52■□□□□ 0.24
HDAC11-202ENST00000402259 ZCCHC10Q8TBK6 192 aa16.52■□□□□ 0.24
HDAC11-202ENST00000402259 CCT6BQ92526 530 aa16.52■□□□□ 0.24
HDAC11-202ENST00000402259 MS4A6EQ96DS6 147 aa16.52■□□□□ 0.24
HDAC11-202ENST00000402259 RNF31Q96EP0 1072 aa16.52■□□□□ 0.24
HDAC11-202ENST00000402259 CCNL2Q96S94 520 aaPredicted RBP16.52■□□□□ 0.24
HDAC11-202ENST00000402259 REXO4Q9GZR2 422 aaKnown RBP16.52■□□□□ 0.24
HDAC11-202ENST00000402259 GPN2Q9H9Y4 310 aaPredicted RBP16.52■□□□□ 0.24
HDAC11-202ENST00000402259 DMRT3Q9NQL9 472 aa16.52■□□□□ 0.24
HDAC11-202ENST00000402259 ACSS2Q9NR19 701 aa16.52■□□□□ 0.24
HDAC11-202ENST00000402259 SLC22A11Q9NSA0 550 aa16.52■□□□□ 0.24
HDAC11-202ENST00000402259 NKIRAS1Q9NYS0 192 aa16.52■□□□□ 0.24
HDAC11-202ENST00000402259 IFT80Q9P2H3 777 aaPredicted RBP16.52■□□□□ 0.24
HDAC11-202ENST00000402259 WDFY3Q8IZQ1 3526 aa16.52■□□□□ 0.23
HDAC11-202ENST00000402259 FRYQ5TBA9 3013 aa16.51■□□□□ 0.23
HDAC11-202ENST00000402259 MAP1BP46821 2468 aaKnown RBP16.51■□□□□ 0.23
HDAC11-202ENST00000402259 IGLV3-12A0A075B6K2 115 aa16.51■□□□□ 0.23
HDAC11-202ENST00000402259 A0A0A6YYC8 382 aaPredicted RBP16.51■□□□□ 0.23
HDAC11-202ENST00000402259 I3L1I5 382 aaPredicted RBP16.51■□□□□ 0.23
HDAC11-202ENST00000402259 UBFD1O14562 309 aaKnown RBP16.51■□□□□ 0.23
HDAC11-202ENST00000402259 GALR3O60755 368 aaPredicted RBP16.51■□□□□ 0.23
HDAC11-202ENST00000402259 RECKO95980 971 aa16.51■□□□□ 0.23
HDAC11-202ENST00000402259 KRT6AP02538 564 aa16.51■□□□□ 0.23
HDAC11-202ENST00000402259 KRT6BP04259 564 aa16.51■□□□□ 0.23
HDAC11-202ENST00000402259 FBLP22087 321 aaKnown RBP16.51■□□□□ 0.23
HDAC11-202ENST00000402259 PTX3P26022 381 aaPredicted RBP16.51■□□□□ 0.23
HDAC11-202ENST00000402259 HNRNPH1P31943 449 aaKnown RBP16.51■□□□□ 0.23
HDAC11-202ENST00000402259 KRT6CP48668 564 aa16.51■□□□□ 0.23
HDAC11-202ENST00000402259 UCNP55089 124 aa16.51■□□□□ 0.23
HDAC11-202ENST00000402259 RPS15P62841 145 aaKnown RBP16.51■□□□□ 0.23
HDAC11-202ENST00000402259 CUL3Q13618 768 aa16.51■□□□□ 0.23
HDAC11-202ENST00000402259 RCN2Q14257 317 aa16.51■□□□□ 0.23
HDAC11-202ENST00000402259 NCF4Q15080 339 aa16.51■□□□□ 0.23
HDAC11-202ENST00000402259 DEPDC1Q5TB30 811 aa16.51■□□□□ 0.23
HDAC11-202ENST00000402259 HHATQ5VTY9 493 aa16.51■□□□□ 0.23
HDAC11-202ENST00000402259 BROXQ5VW32 411 aa16.51■□□□□ 0.23
HDAC11-202ENST00000402259 TTC19Q6DKK2 380 aaPredicted RBP16.51■□□□□ 0.23
HDAC11-202ENST00000402259 LCN10Q6JVE6 187 aa16.51■□□□□ 0.23
HDAC11-202ENST00000402259 TRIM40Q6P9F5 258 aa16.51■□□□□ 0.23
HDAC11-202ENST00000402259 FAM199XQ6PEV8 388 aaPredicted RBP16.51■□□□□ 0.23
HDAC11-202ENST00000402259 COX15Q7KZN9 410 aa16.51■□□□□ 0.23
HDAC11-202ENST00000402259 OVCH1Q7RTY7 1134 aa16.51■□□□□ 0.23
HDAC11-202ENST00000402259 OR9A4Q8NGU2 314 aa16.51■□□□□ 0.23
HDAC11-202ENST00000402259 MMABQ96EY8 250 aaPredicted RBP16.51■□□□□ 0.23
HDAC11-202ENST00000402259 NAF1Q96HR8 494 aaKnown RBP16.51■□□□□ 0.23
HDAC11-202ENST00000402259 CNTNAP3BQ96NU0 1288 aa16.51■□□□□ 0.23
HDAC11-202ENST00000402259 CNTNAP3Q9BZ76 1288 aa16.51■□□□□ 0.23
HDAC11-202ENST00000402259 ROGDIQ9GZN7 287 aa16.51■□□□□ 0.23
HDAC11-202ENST00000402259 AICDAQ9GZX7 198 aa16.51■□□□□ 0.23
HDAC11-202ENST00000402259 KLHL31Q9H511 634 aa16.51■□□□□ 0.23
HDAC11-202ENST00000402259 ELOVL6Q9H5J4 265 aa16.51■□□□□ 0.23
HDAC11-202ENST00000402259 WDR54Q9H977 334 aa16.51■□□□□ 0.23
HDAC11-202ENST00000402259 EML4Q9HC35 981 aaKnown RBP16.51■□□□□ 0.23
HDAC11-202ENST00000402259 MID1IP1Q9NPA3 183 aa16.51■□□□□ 0.23
HDAC11-202ENST00000402259 GPN3Q9UHW5 284 aaPredicted RBP16.51■□□□□ 0.23
HDAC11-202ENST00000402259 MAP4K5Q9Y4K4 846 aa16.51■□□□□ 0.23
HDAC11-202ENST00000402259 FREM2Q5SZK8 3169 aa16.5■□□□□ 0.23
HDAC11-202ENST00000402259 A0A088AWK7 358 aa16.5■□□□□ 0.23
HDAC11-202ENST00000402259 KLHL18O94889 574 aa16.5■□□□□ 0.23
HDAC11-202ENST00000402259 SNUPNO95149 360 aaKnown RBP16.5■□□□□ 0.23
HDAC11-202ENST00000402259 ZNF888P0CJ79 500 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms