RNA–Protein interactions for RNA: ENST00000398529.7

RAB1A-201, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB1A, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-201ENST00000398529 TAS2R50P59544 299 aa13.52□□□□□ -0.25
RAB1A-201ENST00000398529 NAB1Q13506 487 aa13.52□□□□□ -0.25
RAB1A-201ENST00000398529 FAM53BQ14153 422 aa13.52□□□□□ -0.25
RAB1A-201ENST00000398529 EFTUD2Q15029 972 aaKnown RBP eCLIP13.52□□□□□ -0.251e-9■■□□□ 11.5
RAB1A-201ENST00000398529 EXT1Q16394 746 aa13.52□□□□□ -0.25
RAB1A-201ENST00000398529 HKDC1Q2TB90 917 aa13.52□□□□□ -0.25
RAB1A-201ENST00000398529 CCSMST1Q4G0I0 132 aa13.52□□□□□ -0.25
RAB1A-201ENST00000398529 CTSL3PQ5NE16 218 aa13.52□□□□□ -0.25
RAB1A-201ENST00000398529 PLAG1Q6DJT9 500 aa13.52□□□□□ -0.25
RAB1A-201ENST00000398529 Q6ZPB1 254 aaPredicted RBP13.52□□□□□ -0.25
RAB1A-201ENST00000398529 STRA8Q7Z7C7 330 aa13.52□□□□□ -0.25
RAB1A-201ENST00000398529 BEST3Q8N1M1 668 aa13.52□□□□□ -0.25
RAB1A-201ENST00000398529 GHDCQ8N2G8 530 aa13.52□□□□□ -0.25
RAB1A-201ENST00000398529 PPM1NQ8N819 430 aa13.52□□□□□ -0.25
RAB1A-201ENST00000398529 AMER3Q8N944 861 aa13.52□□□□□ -0.25
RAB1A-201ENST00000398529 OR9A1PQ8NGU1 263 aa13.52□□□□□ -0.25
RAB1A-201ENST00000398529 UHMK1Q8TAS1 419 aaKnown RBP13.52□□□□□ -0.25
RAB1A-201ENST00000398529 UBLCP1Q8WVY7 318 aaPredicted RBP13.52□□□□□ -0.25
RAB1A-201ENST00000398529 BIRC8Q96P09 236 aa13.52□□□□□ -0.25
RAB1A-201ENST00000398529 CYTH2Q99418 400 aa13.52□□□□□ -0.25
RAB1A-201ENST00000398529 CPNE1Q99829 537 aa13.52□□□□□ -0.25
RAB1A-201ENST00000398529 EPB41L4BQ9H329 900 aa13.52□□□□□ -0.25
RAB1A-201ENST00000398529 ZNF835Q9Y2P0 537 aa13.52□□□□□ -0.25
RAB1A-201ENST00000398529 NFS1Q9Y697 457 aa13.52□□□□□ -0.25
RAB1A-201ENST00000398529 H3BMM5 538 aa13.51□□□□□ -0.25
RAB1A-201ENST00000398529 ASNA1O43681 348 aa13.51□□□□□ -0.25
RAB1A-201ENST00000398529 NRP2O60462 931 aa13.51□□□□□ -0.25
RAB1A-201ENST00000398529 ESR1P03372 595 aa13.51□□□□□ -0.25
RAB1A-201ENST00000398529 KIR3DL1P43629 444 aa13.51□□□□□ -0.25
RAB1A-201ENST00000398529 AGTR2P50052 363 aa13.51□□□□□ -0.25
RAB1A-201ENST00000398529 ACTN3Q08043 901 aaPredicted RBP13.51□□□□□ -0.25
RAB1A-201ENST00000398529 TUBA3CQ13748 450 aa13.51□□□□□ -0.25
RAB1A-201ENST00000398529 ARHGAP19Q14CB8 494 aa13.51□□□□□ -0.25
RAB1A-201ENST00000398529 OR1C1Q15619 314 aa13.51□□□□□ -0.25
RAB1A-201ENST00000398529 ZNF549Q6P9A3 640 aa13.51□□□□□ -0.25
RAB1A-201ENST00000398529 TUBA3EQ6PEY2 450 aa13.51□□□□□ -0.25
RAB1A-201ENST00000398529 ZC3H7AQ8IWR0 971 aaKnown RBP13.51□□□□□ -0.25
RAB1A-201ENST00000398529 SLC5A8Q8N695 610 aa13.51□□□□□ -0.25
RAB1A-201ENST00000398529 TSPAN10Q9H1Z9 355 aaPredicted RBP13.51□□□□□ -0.25
RAB1A-201ENST00000398529 CCDC68Q9H2F9 335 aa13.51□□□□□ -0.25
RAB1A-201ENST00000398529 TSR3Q9UJK0 312 aaKnown RBP13.51□□□□□ -0.25
RAB1A-201ENST00000398529 RUVBL2Q9Y230 463 aaKnown RBP13.51□□□□□ -0.25
RAB1A-201ENST00000398529 COMMD10Q9Y6G5 202 aa13.51□□□□□ -0.25
RAB1A-201ENST00000398529 ZFHX3Q15911 3703 aa13.51□□□□□ -0.25
RAB1A-201ENST00000398529 A0A1W2PPV9 198 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 FOXO6A8MYZ6 492 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 E9PLN8 166 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 H0YIG0 161 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 NIPSNAP2O75323 286 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 CATP04040 527 aaKnown RBP13.5□□□□□ -0.25
RAB1A-201ENST00000398529 GP5P40197 560 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 CD96P40200 585 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 KRTAP10-9P60411 292 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 CSNK1G2P78368 415 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 ABATP80404 500 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 MAT1AQ00266 395 aaKnown RBP13.5□□□□□ -0.25
RAB1A-201ENST00000398529 RELAQ04206 551 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 PRDX1Q06830 199 aaKnown RBP13.5□□□□□ -0.25
RAB1A-201ENST00000398529 FASTKQ14296 549 aaKnown RBP13.5□□□□□ -0.25
RAB1A-201ENST00000398529 SLC29A2Q14542 456 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 TESK1Q15569 626 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 UAP1Q16222 522 aaPredicted RBP13.5□□□□□ -0.25
RAB1A-201ENST00000398529 SYT16Q17RD7 645 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 KLHL38Q2WGJ6 581 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 THEMIS2Q5TEJ8 643 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 ICE2Q659A1 982 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 FCRLBQ6BAA4 426 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 SUSD1Q6UWL2 747 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 ZC3HC1Q86WB0 502 aaKnown RBP13.5□□□□□ -0.25
RAB1A-201ENST00000398529 PAQR7Q86WK9 346 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 AGAP11Q8TF27 550 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 PHF10Q8WUB8 498 aaKnown RBP13.5□□□□□ -0.25
RAB1A-201ENST00000398529 SDCCAG3Q96C92 435 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 VKORC1Q9BQB6 163 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 MCMBPQ9BTE3 642 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 AARSD1Q9BTE6 412 aaKnown RBP13.5□□□□□ -0.25
RAB1A-201ENST00000398529 VN1R1Q9GZP7 353 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 RHOJQ9H4E5 214 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 ABCF3Q9NUQ8 709 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 ANKRD10Q9NXR5 420 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 TXNDC16Q9P2K2 825 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 TAC3Q9UHF0 121 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 CORO1CQ9ULV4 474 aaPredicted RBP13.5□□□□□ -0.25
RAB1A-201ENST00000398529 PPT2Q9UMR5 302 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 NF1P21359 2839 aa13.5□□□□□ -0.25
RAB1A-201ENST00000398529 IGHV3-20A0A0C4DH32 117 aa13.49□□□□□ -0.25
RAB1A-201ENST00000398529 FOXS1O43638 330 aa13.49□□□□□ -0.25
RAB1A-201ENST00000398529 ERLIN1O75477 346 aa13.49□□□□□ -0.25
RAB1A-201ENST00000398529 CHRM3P20309 590 aa13.49□□□□□ -0.25
RAB1A-201ENST00000398529 ATP5DP30049 168 aa13.49□□□□□ -0.25
RAB1A-201ENST00000398529 HSD17B3P37058 310 aa13.49□□□□□ -0.25
RAB1A-201ENST00000398529 PNLIPRP1P54315 467 aa13.49□□□□□ -0.25
RAB1A-201ENST00000398529 YBX1P67809 324 aaKnown RBP13.49□□□□□ -0.25
RAB1A-201ENST00000398529 ILF2Q12905 390 aaKnown RBP13.49□□□□□ -0.25
RAB1A-201ENST00000398529 MAPKAPK3Q16644 382 aa13.49□□□□□ -0.25
RAB1A-201ENST00000398529 RBM20Q5T481 1227 aaKnown RBP13.49□□□□□ -0.25
RAB1A-201ENST00000398529 GRTP1Q5TC63 336 aa13.49□□□□□ -0.25
RAB1A-201ENST00000398529 SPINK14Q6IE38 97 aa13.49□□□□□ -0.25
RAB1A-201ENST00000398529 H3F3CQ6NXT2 135 aa13.49□□□□□ -0.25
RAB1A-201ENST00000398529 CRLF3Q8IUI8 442 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms