RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 STARD7Q9NQZ5 370 aa15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 EIF3KQ9UBQ5 218 aaKnown RBP15.41■□□□□ 0.06
CHMP1A-201ENST00000397901 PCDHGA12O60330 932 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 WBP4O75554 376 aaKnown RBP15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 COL6A1P12109 1028 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 IFI30P13284 250 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 ENGP17813 658 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 ACRV1P26436 265 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 RPP38P78345 283 aaKnown RBP15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 CHRNA6Q15825 494 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 PRSS36Q5K4E3 855 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 OR4M1Q8NGD0 313 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 CDC26Q8NHZ8 85 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 PIH1D2Q8WWB5 315 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 TMEM80Q96HE8 168 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 TPD52L3Q96J77 140 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 ZSCAN5AQ9BUG6 496 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 SLC29A3Q9BZD2 475 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 NIPAL2Q9H841 368 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 TIGARQ9NQ88 270 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 GLTPQ9NZD2 209 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 TMPRSS11EQ9UL52 423 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 LOC100506127A0A0U1RQW1 187 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 CLIC1O00299 241 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 TFECO14948 347 aaPredicted RBP15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 CYP2A6P11509 494 aaPredicted RBP15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 GLULP15104 373 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 GZMKP49863 264 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 GPNMBQ14956 572 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 TIGD3Q6B0B8 471 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 PDE12Q6L8Q7 609 aaKnown RBP15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 RNF165Q6ZSG1 346 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 ZNF621Q6ZSS3 439 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 CHST9Q7L1S5 443 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 TSPYL5Q86VY4 417 aaPredicted RBP15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 PXYLP1Q8TE99 480 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 SKA2Q8WVK7 121 aaPredicted RBP15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 APH1BQ8WW43 257 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 NELL1Q92832 810 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 DNASE1L2Q92874 299 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 PANX1Q96RD7 426 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 BEX2Q9BXY8 128 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 KCNN2Q9H2S1 579 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 AMBNQ9NP70 447 aa15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 THUMPD1Q9NXG2 353 aaKnown RBP15.4■□□□□ 0.06
CHMP1A-201ENST00000397901 CCDC182A6NF36 153 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 FPGTO14772 594 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 EPN2O95208 641 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 CPSF4O95639 269 aaKnown RBP15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 VIPP01282 170 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 PDGFAP04085 211 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 ANXA5P08758 320 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 PRPS2P11908 318 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 PRKACAP17612 351 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 KIR3DL1P43629 444 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 RPIAP49247 311 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 MAPK12P53778 367 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 CSNK2BP67870 215 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 VMACQ2NL98 169 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 HECTD3Q5T447 861 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 ADGRF1Q5T601 910 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 ZZZ3Q8IYH5 903 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 RAET1EQ8TD07 263 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 ELAC1Q9H777 363 aaKnown RBP15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 REEP1Q9H902 201 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 ZNF451Q9Y4E5 1061 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 GLYATL1P3A0A0U1RQE8 302 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 ZNF840PA6NDX5 716 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 ADAM12O43184 909 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 TBL1XO60907 577 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 KCNK5O95279 499 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 ALPPP05187 535 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 BPIP17213 487 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 C21orf33P30042 268 aaPredicted RBP15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 KDELR2P33947 212 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 NPRL3Q12980 569 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 TBCEQ15813 527 aaPredicted RBP15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 GPR153Q6NV75 609 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 TAS1R1Q7RTX1 841 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 LHFPL5Q8TAF8 219 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 TBC1D20Q96BZ9 403 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 Q96MT0 163 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 CASD1Q96PB1 797 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 SLC32A1Q9H598 525 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 LIN7BQ9HAP6 207 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 MARCH5Q9NX47 278 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 KLHL21Q9UJP4 597 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 SNX7Q9UNH6 387 aa15.39■□□□□ 0.05
CHMP1A-201ENST00000397901 SELPP16109 830 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 HOXB6P17509 224 aaKnown RBP15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 RPL17P18621 184 aaKnown RBP15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 GRK5P34947 590 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 ZXDBP98169 803 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 ZXDCQ2QGD7 858 aaPredicted RBP15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 PROX2Q3B8N5 592 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 TTLL9Q3SXZ7 439 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 SERPINA11Q86U17 422 aa15.38■□□□□ 0.05
CHMP1A-201ENST00000397901 ENTHD1Q8IYW4 607 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms