RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 HERC3Q15034 1050 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 SLC44A3Q8N4M1 653 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 ZNF540Q8NDQ6 660 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 IPCEF1Q8WWN9 437 aaPredicted RBP14.82□□□□□ -0.04
LSS-202ENST00000397728 FUBP1Q96AE4 644 aaKnown RBP14.82□□□□□ -0.04
LSS-202ENST00000397728 ANKRD27Q96NW4 1050 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 MUC13Q9H3R2 512 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 ELL3Q9HB65 397 aaPredicted RBP14.82□□□□□ -0.04
LSS-202ENST00000397728 ARNT2Q9HBZ2 717 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 TMEM184CQ9NVA4 438 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 FAM120CQ9NX05 1096 aaKnown RBP14.82□□□□□ -0.04
LSS-202ENST00000397728 ENTPD2Q9Y5L3 495 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 FADS3Q9Y5Q0 445 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 EIF3FO00303 357 aaPredicted RBP14.82□□□□□ -0.04
LSS-202ENST00000397728 TLX3O43711 291 aaPredicted RBP14.82□□□□□ -0.04
LSS-202ENST00000397728 F3P13726 295 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 YPEL5P62699 121 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 P4HA3Q7Z4N8 544 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 ZDHHC21Q8IVQ6 265 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 UBALD2Q8IYN6 164 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 SH3YL1Q96HL8 342 aaPredicted RBP14.82□□□□□ -0.04
LSS-202ENST00000397728 CIB1Q99828 191 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 REEP4Q9H6H4 257 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 SLC24A3Q9HC58 644 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 TOR4AQ9NXH8 423 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 TAAR2Q9P1P5 351 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 ANKMY1Q9P2S6 941 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 IKZF2Q9UKS7 526 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 LINC00854A0A1B0GVQ3 168 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 TRIM25Q14258 630 aaKnown RBP14.82□□□□□ -0.04
LSS-202ENST00000397728 ANGPT1Q15389 498 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 NSDHLQ15738 373 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 ZNF311Q5JNZ3 666 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 OR4N5Q8IXE1 308 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 DAZLQ92904 295 aaKnown RBP14.82□□□□□ -0.04
LSS-202ENST00000397728 GTPBP3Q969Y2 492 aaKnown RBP14.82□□□□□ -0.04
LSS-202ENST00000397728 TMEM168Q9H0V1 697 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 GAREM1Q9H706 876 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 TAS2R9Q9NYW1 312 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 SHOX2O60902 331 aaPredicted RBP14.82□□□□□ -0.04
LSS-202ENST00000397728 PDHA2P29803 388 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 TALDO1P37837 337 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 ISCA2Q86U28 154 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 KLHDC8AQ8IYD2 350 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 LRRC58Q96CX6 371 aa14.82□□□□□ -0.04
LSS-202ENST00000397728 GPR89AB7ZAQ6 455 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 E7EQ34 232 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 GPR89BP0CG08 455 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 ACSL1P33121 698 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 SIM1P81133 766 aaPredicted RBP14.81□□□□□ -0.04
LSS-202ENST00000397728 PCDH1Q08174 1060 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 OR52E1Q8NGJ3 308 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 RAB8BQ92930 207 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 NEK6Q9HC98 313 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 ERGIC3Q9Y282 383 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 NME7Q9Y5B8 376 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 IGLV3-10A0A075B6K4 115 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 KLF11O14901 512 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 TNFAIP8O95379 198 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 FGF3P11487 239 aaPredicted RBP14.81□□□□□ -0.04
LSS-202ENST00000397728 ITGA3P26006 1051 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 ACADLP28330 430 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 TIA1P31483 386 aaKnown RBP eCLIP14.81□□□□□ -0.047e-7■■□□□ 12.6
LSS-202ENST00000397728 CDK6Q00534 326 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 WSCD2Q2TBF2 565 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 SMARCD3Q6STE5 483 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 PQLC1Q8N2U9 271 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 SFRP1Q8N474 314 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 SEC14L1Q92503 715 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 MIEF2Q96C03 454 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 CMKLR1Q99788 373 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 SDHAF3Q9NRP4 125 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 WDR45Q9Y484 360 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 FAM25AB3EWG3 89 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 FAM25CB3EWG5 89 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 FAM25GB3EWG6 89 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 FANCGO15287 622 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 GADD45GO95257 159 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 ATXN1LP0C7T5 689 aaKnown RBP14.81□□□□□ -0.04
LSS-202ENST00000397728 ZDHHC11BP0C7U3 371 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 INAQ16352 499 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 HIPK1Q86Z02 1210 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 OR2L2Q8NH16 312 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 C10orf82Q8WW14 230 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 LRCH3Q96II8 777 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 SLC6A18Q96N87 628 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 RPF2Q9H7B2 306 aaKnown RBP14.81□□□□□ -0.04
LSS-202ENST00000397728 LRCH1Q9Y2L9 728 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 DNMT3AQ9Y6K1 912 aaPredicted RBP14.81□□□□□ -0.04
LSS-202ENST00000397728 HCN1O60741 890 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 MFN2O95140 757 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 CCR7P32248 378 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 SHC2P98077 582 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 GANABQ14697 944 aaKnown RBP14.81□□□□□ -0.04
LSS-202ENST00000397728 FAM160A2Q8N612 972 aaPredicted RBP14.81□□□□□ -0.04
LSS-202ENST00000397728 OR13J1Q8NGT2 312 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 MKKSQ9NPJ1 570 aaPredicted RBP14.81□□□□□ -0.04
LSS-202ENST00000397728 RASSF1Q9NS23 344 aa14.81□□□□□ -0.04
LSS-202ENST00000397728 SLC9B1P1A6NJY1 282 aa14.8□□□□□ -0.04
LSS-202ENST00000397728 M0QX08 132 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms