RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 HIST1H2ACQ93077 130 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 PDXPQ96GD0 296 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 METTL2AQ96IZ6 378 aaKnown RBP7.95□□□□□ -1.14
PTPRD-204ENST00000397606 PELOQ9BRX2 385 aaKnown RBP7.95□□□□□ -1.14
PTPRD-204ENST00000397606 IRF2BPLQ9H1B7 796 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 SAMHD1Q9Y3Z3 626 aaKnown RBP7.95□□□□□ -1.14
PTPRD-204ENST00000397606 ZNF860A6NHJ4 632 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 METTL12A8MUP2 240 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 PSIP1O75475 530 aaKnown RBP7.95□□□□□ -1.14
PTPRD-204ENST00000397606 GPIP06744 558 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 HNRNPH1P31943 449 aaKnown RBP7.95□□□□□ -1.14
PTPRD-204ENST00000397606 MSX2P35548 267 aaPredicted RBP7.95□□□□□ -1.14
PTPRD-204ENST00000397606 GGT5P36269 586 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 CENPAP49450 140 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 NUP107P57740 925 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 GRB7Q14451 532 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 PTGR1Q14914 329 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 TNFAIP8L2Q6P589 184 aaPredicted RBP7.95□□□□□ -1.14
PTPRD-204ENST00000397606 ZSWIM9Q86XI8 627 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 SPPL2CQ8IUH8 684 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 SETD9Q8NE22 299 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 ADCY4Q8NFM4 1077 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 LRRC3BQ96PB8 259 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 LGR4Q9BXB1 951 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 PRTFDC1Q9NRG1 225 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 WSB2Q9NYS7 404 aaPredicted RBP7.95□□□□□ -1.14
PTPRD-204ENST00000397606 NEU3Q9UQ49 428 aa7.95□□□□□ -1.14
PTPRD-204ENST00000397606 TRBC2A0A5B9 178 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 IFNW1P05000 195 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 CHRM5P08912 532 aaPredicted RBP7.94□□□□□ -1.14
PTPRD-204ENST00000397606 ENGP17813 658 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 ATP5A1P25705 553 aaKnown RBP7.94□□□□□ -1.14
PTPRD-204ENST00000397606 FEN1P39748 380 aaKnown RBP7.94□□□□□ -1.14
PTPRD-204ENST00000397606 LRRC74BQ6ZQY2 392 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 SLC29A4Q7RTT9 530 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 TRIM73Q86UV7 250 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 ZFPM2Q8WW38 1151 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 MR1Q95460 341 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 MOAP1Q96BY2 351 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 SLC30A3Q99726 388 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 APOL4Q9BPW4 351 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 SEMA6AQ9H2E6 1030 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 ACTL8Q9H568 366 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 GAREM1Q9H706 876 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 TMEM27Q9HBJ8 222 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 ANKMY1Q9P2S6 941 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 CNOT6Q9ULM6 557 aaKnown RBP7.94□□□□□ -1.14
PTPRD-204ENST00000397606 SH3GLB1Q9Y371 365 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 SLC5A10A0PJK1 596 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 CLEC3AO75596 197 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 CD160O95971 181 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 IL3P08700 152 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 FBLP22087 321 aaKnown RBP7.94□□□□□ -1.14
PTPRD-204ENST00000397606 TEAD1P28347 426 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 RGS8P57771 180 aaPredicted RBP7.94□□□□□ -1.14
PTPRD-204ENST00000397606 TAS2R41P59536 307 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 RPS7P62081 194 aaKnown RBP7.94□□□□□ -1.14
PTPRD-204ENST00000397606 RPP38P78345 283 aaKnown RBP7.94□□□□□ -1.14
PTPRD-204ENST00000397606 SPIBQ01892 262 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 OR52E8Q6IFG1 317 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 SLC2A7Q6PXP3 512 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 SPESP1Q6UW49 350 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 SDR16C5Q8N3Y7 309 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 FAM13CQ8NE31 585 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 ZNF563Q8TA94 476 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 ZUFSPQ96AP4 578 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 S1PR5Q9H228 398 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 P2RX2Q9UBL9 471 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 SLC6A14Q9UN76 642 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 MICAL3Q7RTP6 2002 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 H0Y8X5 98 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 K7EQS6 105 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 BTN3A3O00478 584 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 CXCR6O00574 342 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 FAM58BPP0C7Q3 252 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 IMPA1P29218 277 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 CCT3P49368 545 aaKnown RBP7.94□□□□□ -1.14
PTPRD-204ENST00000397606 HTR6P50406 440 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 CLDN8P56748 225 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 DSTNP60981 165 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 NR1D2Q14995 579 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 CDKN3Q16667 212 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 SBSNQ6UWP8 590 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 IKBIPQ70UQ0 350 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 DHRSXQ8N5I4 330 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 CADM4Q8NFZ8 388 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 OR5P2Q8WZ92 322 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 CNBD2Q96M20 576 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 ANKRD27Q96NW4 1050 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 TPT1P8Q9HAU6 139 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 Q9N2J8 555 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 TEKT2Q9UIF3 430 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 MCM8Q9UJA3 840 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 C3orf18Q9UK00 162 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 LCTP09848 1927 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 E7ENX8 843 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 UGT2B17O75795 530 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 IL7RP16871 459 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 CAPZA2P47755 286 aa7.94□□□□□ -1.14
PTPRD-204ENST00000397606 MASP1P48740 699 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms