RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 SFTPA2Q8IWL1 248 aa18.16■□□□□ 0.5
TSPAN4-204ENST00000397404 ZCCHC7Q8N3Z6 543 aaKnown RBP18.16■□□□□ 0.5
TSPAN4-204ENST00000397404 DPP10Q8N608 796 aa18.16■□□□□ 0.5
TSPAN4-204ENST00000397404 VPS37AQ8NEZ2 397 aa18.16■□□□□ 0.5
TSPAN4-204ENST00000397404 OR8J2Q8NGG1 315 aa18.16■□□□□ 0.5
TSPAN4-204ENST00000397404 WDR48Q8TAF3 677 aa18.16■□□□□ 0.5
TSPAN4-204ENST00000397404 MCUR1Q96AQ8 359 aa18.16■□□□□ 0.5
TSPAN4-204ENST00000397404 ARRDC1-AS1Q9H2J1 176 aa18.16■□□□□ 0.5
TSPAN4-204ENST00000397404 GMEB2Q9UKD1 530 aa18.16■□□□□ 0.5
TSPAN4-204ENST00000397404 PRPF19Q9UMS4 504 aaKnown RBP18.16■□□□□ 0.5
TSPAN4-204ENST00000397404 DLGAP4Q9Y2H0 992 aa18.16■□□□□ 0.5
TSPAN4-204ENST00000397404 C15orf38-AP3S2A0A0A6YYH1 394 aa18.15■□□□□ 0.5
TSPAN4-204ENST00000397404 PLPP1O14494 284 aa18.15■□□□□ 0.5
TSPAN4-204ENST00000397404 TBX19O60806 448 aa18.15■□□□□ 0.5
TSPAN4-204ENST00000397404 SCELO95171 688 aa18.15■□□□□ 0.5
TSPAN4-204ENST00000397404 ALDH4A1P30038 563 aa18.15■□□□□ 0.5
TSPAN4-204ENST00000397404 EMP3P54852 163 aa18.15■□□□□ 0.5
TSPAN4-204ENST00000397404 PTGR1Q14914 329 aa18.15■□□□□ 0.5
TSPAN4-204ENST00000397404 TCTE1Q5JU00 501 aa18.15■□□□□ 0.5
TSPAN4-204ENST00000397404 OR4C11Q6IEV9 310 aa18.15■□□□□ 0.5
TSPAN4-204ENST00000397404 DBX2Q6ZNG2 339 aa18.15■□□□□ 0.5
TSPAN4-204ENST00000397404 PRSS42Q7Z5A4 293 aa18.15■□□□□ 0.5
TSPAN4-204ENST00000397404 ARPINQ7Z6K5 226 aa18.15■□□□□ 0.5
TSPAN4-204ENST00000397404 RIMKLAQ8IXN7 391 aa18.15■□□□□ 0.5
TSPAN4-204ENST00000397404 PGAM4Q8N0Y7 254 aa18.15■□□□□ 0.5
TSPAN4-204ENST00000397404 TMEM132CQ8N3T6 1108 aa18.15■□□□□ 0.5
TSPAN4-204ENST00000397404 POU5F2Q8N7G0 328 aa18.15■□□□□ 0.5
TSPAN4-204ENST00000397404 RBM15BQ8NDT2 890 aaKnown RBP18.15■□□□□ 0.5
TSPAN4-204ENST00000397404 MS4A6EQ96DS6 147 aa18.15■□□□□ 0.5
TSPAN4-204ENST00000397404 ACTL8Q9H568 366 aa18.15■□□□□ 0.5
TSPAN4-204ENST00000397404 CLK4Q9HAZ1 481 aaKnown RBP18.15■□□□□ 0.5
TSPAN4-204ENST00000397404 PDE7BQ9NP56 450 aa18.15■□□□□ 0.5
TSPAN4-204ENST00000397404 AP3M1Q9Y2T2 418 aa18.15■□□□□ 0.5
TSPAN4-204ENST00000397404 A0A0C4DFX4 3053 aa18.15■□□□□ 0.5
TSPAN4-204ENST00000397404 ZNF318Q5VUA4 2279 aa18.15■□□□□ 0.5
TSPAN4-204ENST00000397404 NR5A2O00482 541 aa18.14■□□□□ 0.5
TSPAN4-204ENST00000397404 FLRT2O43155 660 aa18.14■□□□□ 0.5
TSPAN4-204ENST00000397404 SIGLEC6O43699 453 aa18.14■□□□□ 0.5
TSPAN4-204ENST00000397404 TBX6O95947 436 aaPredicted RBP18.14■□□□□ 0.5
TSPAN4-204ENST00000397404 NUDT2P50583 147 aa18.14■□□□□ 0.5
TSPAN4-204ENST00000397404 RAE1P78406 368 aaKnown RBP18.14■□□□□ 0.5
TSPAN4-204ENST00000397404 CCNYL2Q5T2Q4 361 aa18.14■□□□□ 0.5
TSPAN4-204ENST00000397404 ANXA8L1Q5VT79 327 aa18.14■□□□□ 0.5
TSPAN4-204ENST00000397404 ADNP2Q6IQ32 1131 aa18.14■□□□□ 0.5
TSPAN4-204ENST00000397404 GK5Q6ZS86 529 aa18.14■□□□□ 0.5
TSPAN4-204ENST00000397404 SPRED1Q7Z699 444 aa18.14■□□□□ 0.5
TSPAN4-204ENST00000397404 ZNF761Q86XN6 746 aaPredicted RBP18.14■□□□□ 0.5
TSPAN4-204ENST00000397404 MINDY1Q8N5J2 469 aa18.14■□□□□ 0.5
TSPAN4-204ENST00000397404 OR9I1Q8NGQ6 314 aa18.14■□□□□ 0.5
TSPAN4-204ENST00000397404 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.14■□□□□ 0.5
TSPAN4-204ENST00000397404 NCSTNQ92542 709 aa18.14■□□□□ 0.5
TSPAN4-204ENST00000397404 CCDC3Q9BQI4 270 aa18.14■□□□□ 0.5
TSPAN4-204ENST00000397404 FAM120CQ9NX05 1096 aaKnown RBP18.14■□□□□ 0.5
TSPAN4-204ENST00000397404 TRIM38O00635 465 aa18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 MRASO14807 208 aa18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 PGRP06401 933 aa18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 GP1BAP07359 652 aa18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 ZNF806P0C7X5 589 aa18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 DRD2P14416 443 aa18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 BSGP35613 385 aa18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 CPOXP36551 454 aa18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 SSR2P43308 183 aa18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 KIR3DL1P43629 444 aa18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 PPM1FP49593 454 aaPredicted RBP18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 CORO7P57737 925 aa18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 CYP4F2P78329 520 aa18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 SLC9A5Q14940 896 aa18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 SPRED3Q2MJR0 410 aa18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 GARNL3Q5VVW2 1013 aa18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 REP15Q6BDI9 236 aa18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 ABHD17CQ6PCB6 329 aa18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 VN1R4Q7Z5H5 301 aa18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 TRIM73Q86UV7 250 aa18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 GPR180Q86V85 440 aa18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 RNF175Q8N4F7 328 aa18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 TSSK3Q96PN8 268 aa18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 F2RL3Q96RI0 385 aa18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 FAIM2Q9BWQ8 316 aa18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 SLC52A3Q9NQ40 469 aa18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 LYARQ9NX58 379 aaKnown RBP18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 MS4A12Q9NXJ0 267 aa18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 ATP6V1HQ9UI12 483 aa18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 PLCL2Q9UPR0 1127 aa18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 SLC22A7Q9Y694 548 aa18.14■□□□□ 0.49
TSPAN4-204ENST00000397404 ARID1BQ8NFD5 2236 aaPredicted RBP18.13■□□□□ 0.49
TSPAN4-204ENST00000397404 PATE3B3GLJ2 98 aa18.13■□□□□ 0.49
TSPAN4-204ENST00000397404 SCAMP2O15127 329 aaKnown RBP18.13■□□□□ 0.49
TSPAN4-204ENST00000397404 GSC2O15499 205 aa18.13■□□□□ 0.49
TSPAN4-204ENST00000397404 CTSVO60911 334 aa18.13■□□□□ 0.49
TSPAN4-204ENST00000397404 SNRNP200O75643 2136 aaKnown RBP18.13■□□□□ 0.49
TSPAN4-204ENST00000397404 SERPIND1P05546 499 aa18.13■□□□□ 0.49
TSPAN4-204ENST00000397404 ANKRD34CP0C6C1 535 aa18.13■□□□□ 0.49
TSPAN4-204ENST00000397404 HIST1H1TP22492 207 aaPredicted RBP18.13■□□□□ 0.49
TSPAN4-204ENST00000397404 S100A3P33764 101 aa18.13■□□□□ 0.49
TSPAN4-204ENST00000397404 MAPK12P53778 367 aa18.13■□□□□ 0.49
TSPAN4-204ENST00000397404 HYAL2Q12891 473 aa18.13■□□□□ 0.49
TSPAN4-204ENST00000397404 NDUFA9Q16795 377 aa18.13■□□□□ 0.49
TSPAN4-204ENST00000397404 PROX2Q3B8N5 592 aa18.13■□□□□ 0.49
TSPAN4-204ENST00000397404 TMTC4Q5T4D3 741 aa18.13■□□□□ 0.49
TSPAN4-204ENST00000397404 TMEM71Q6P5X7 295 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms