RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 ADI1Q9BV57 179 aa14.6□□□□□ -0.07
MCF2L-205ENST00000397017 SCN3BQ9NY72 215 aa14.6□□□□□ -0.07
MCF2L-205ENST00000397017 GMPPBQ9Y5P6 360 aa14.6□□□□□ -0.07
MCF2L-205ENST00000397017 SPAG17Q6Q759 2223 aa14.6□□□□□ -0.07
MCF2L-205ENST00000397017 TRBV5-4A0A0C4DH59 114 aa14.6□□□□□ -0.07
MCF2L-205ENST00000397017 C2CD4DB7Z1M9 353 aa14.6□□□□□ -0.07
MCF2L-205ENST00000397017 HNRNPA2B1P22626 353 aaKnown RBP14.6□□□□□ -0.07
MCF2L-205ENST00000397017 PGDP52209 483 aa14.6□□□□□ -0.07
MCF2L-205ENST00000397017 OCA2Q04671 838 aa14.6□□□□□ -0.07
MCF2L-205ENST00000397017 TRAP1Q12931 704 aaKnown RBP14.6□□□□□ -0.07
MCF2L-205ENST00000397017 OGFOD2Q6N063 350 aa14.6□□□□□ -0.07
MCF2L-205ENST00000397017 GPR153Q6NV75 609 aa14.6□□□□□ -0.07
MCF2L-205ENST00000397017 MINDY1Q8N5J2 469 aa14.6□□□□□ -0.07
MCF2L-205ENST00000397017 ADAMTS15Q8TE58 950 aa14.6□□□□□ -0.07
MCF2L-205ENST00000397017 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.59□□□□□ -0.07
MCF2L-205ENST00000397017 AQP12BA6NM10 295 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 RHPN2P1A8MT19 583 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 AREL1O15033 823 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 RPL3P39023 403 aaKnown RBP14.59□□□□□ -0.07
MCF2L-205ENST00000397017 CDKN2CP42773 168 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 WDR53Q7Z5U6 358 aaPredicted RBP14.59□□□□□ -0.07
MCF2L-205ENST00000397017 PDZD3Q86UT5 571 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 AQP12AQ8IXF9 295 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 THAP11Q96EK4 314 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 CNPPD1Q9BV87 410 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 OSBPL11Q9BXB4 747 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 PCBD2Q9H0N5 130 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 POLR1BQ9H9Y6 1135 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 KRT84Q9NSB2 600 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 APOBEC3BQ9UH17 382 aaKnown RBP14.59□□□□□ -0.07
MCF2L-205ENST00000397017 BLOC1S6Q9UL45 172 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 B4GALT2O60909 372 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 PRKRAO75569 313 aaKnown RBP14.59□□□□□ -0.07
MCF2L-205ENST00000397017 NUDT7P0C024 238 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 RAP2AP10114 183 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 DRD1P21728 446 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 VSX2P58304 361 aaPredicted RBP14.59□□□□□ -0.07
MCF2L-205ENST00000397017 SWT1Q5T5J6 900 aaKnown RBP14.59□□□□□ -0.07
MCF2L-205ENST00000397017 FAM91A1Q658Y4 838 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 PGM2L1Q6PCE3 622 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 ZNF852Q6ZMS4 543 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 GPR141Q7Z602 305 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 KRT73Q86Y46 540 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 ETFBKMTQ8IXQ9 262 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 C8orf59Q8N0T1 100 aaPredicted RBP14.59□□□□□ -0.07
MCF2L-205ENST00000397017 KAT2AQ92830 837 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 FOXQ1Q9C009 403 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 REEP4Q9H6H4 257 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 SMPD3Q9NY59 655 aaPredicted RBP14.59□□□□□ -0.07
MCF2L-205ENST00000397017 GABRR3A8MPY1 467 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 SLCO2B1O94956 709 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 SCELO95171 688 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 MATN4O95460 622 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 TFF2Q03403 129 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 STX4Q12846 297 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 SLAMF1Q13291 335 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 Q7L0L9 218 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 MMP21Q8N119 569 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 ZFP28Q8NHY6 868 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 DUSP12Q9UNI6 340 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 OR10H1Q9Y4A9 318 aa14.59□□□□□ -0.07
MCF2L-205ENST00000397017 FABP3P05413 133 aa14.58□□□□□ -0.08
MCF2L-205ENST00000397017 SIM1P81133 766 aaPredicted RBP14.58□□□□□ -0.08
MCF2L-205ENST00000397017 KCNC3Q14003 757 aa14.58□□□□□ -0.08
MCF2L-205ENST00000397017 CEP68Q76N32 757 aa14.58□□□□□ -0.08
MCF2L-205ENST00000397017 SIX5Q8N196 739 aa14.58□□□□□ -0.08
MCF2L-205ENST00000397017 C3orf18Q9UK00 162 aa14.58□□□□□ -0.08
MCF2L-205ENST00000397017 TMED5Q9Y3A6 229 aa14.58□□□□□ -0.08
MCF2L-205ENST00000397017 FAM20BO75063 409 aa14.58□□□□□ -0.08
MCF2L-205ENST00000397017 NPPBP16860 134 aa14.58□□□□□ -0.08
MCF2L-205ENST00000397017 ZNF10P21506 573 aaPredicted RBP14.58□□□□□ -0.08
MCF2L-205ENST00000397017 TPMTP51580 245 aa14.58□□□□□ -0.08
MCF2L-205ENST00000397017 ADPRHP54922 357 aa14.58□□□□□ -0.08
MCF2L-205ENST00000397017 SLC13A2Q13183 592 aa14.58□□□□□ -0.08
MCF2L-205ENST00000397017 SCARB2Q14108 478 aa14.58□□□□□ -0.08
MCF2L-205ENST00000397017 NNATQ16517 81 aa14.58□□□□□ -0.08
MCF2L-205ENST00000397017 LPCAT2Q7L5N7 544 aa14.58□□□□□ -0.08
MCF2L-205ENST00000397017 ZBED6CLQ96FA7 236 aaPredicted RBP14.58□□□□□ -0.08
MCF2L-205ENST00000397017 RALGAPA2Q2PPJ7 1873 aa14.58□□□□□ -0.08
MCF2L-205ENST00000397017 PRSS38A1L453 326 aa14.58□□□□□ -0.08
MCF2L-205ENST00000397017 SNAP29O95721 258 aa14.58□□□□□ -0.08
MCF2L-205ENST00000397017 NDUFV2P19404 249 aa14.58□□□□□ -0.08
MCF2L-205ENST00000397017 GK3PQ14409 553 aa14.58□□□□□ -0.08
MCF2L-205ENST00000397017 PIP5KL1Q5T9C9 394 aa14.58□□□□□ -0.08
MCF2L-205ENST00000397017 GRHL2Q6ISB3 625 aa14.58□□□□□ -0.08
MCF2L-205ENST00000397017 PDSS2Q86YH6 399 aa14.58□□□□□ -0.08
MCF2L-205ENST00000397017 ARL10Q8N8L6 244 aa14.58□□□□□ -0.08
MCF2L-205ENST00000397017 NETO1Q8TDF5 533 aa14.58□□□□□ -0.08
MCF2L-205ENST00000397017 GTF2H4Q92759 462 aa14.58□□□□□ -0.08
MCF2L-205ENST00000397017 KLHL28Q9NXS3 571 aa14.58□□□□□ -0.08
MCF2L-205ENST00000397017 TMEM181Q9P2C4 612 aa14.58□□□□□ -0.08
MCF2L-205ENST00000397017 WDR37Q9Y2I8 494 aa14.58□□□□□ -0.08
MCF2L-205ENST00000397017 LRRC42Q9Y546 428 aa14.58□□□□□ -0.08
MCF2L-205ENST00000397017 CACNA1CQ13936 2221 aa14.57□□□□□ -0.08
MCF2L-205ENST00000397017 SLC5A10A0PJK1 596 aa14.57□□□□□ -0.08
MCF2L-205ENST00000397017 WASHC1A8K0Z3 465 aa14.57□□□□□ -0.08
MCF2L-205ENST00000397017 THRBP10828 461 aa14.57□□□□□ -0.08
MCF2L-205ENST00000397017 ANXA11P50995 505 aaKnown RBP14.57□□□□□ -0.08
MCF2L-205ENST00000397017 DPY19L1Q2PZI1 675 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms