RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 GOT1P17174 413 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 METTL11BQ5VVY1 283 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 TLDC1Q6P9B6 456 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 KIAA1324Q6UXG2 1013 aaKnown RBP13.03□□□□□ -0.32
USP49-203ENST00000394253 STRADAQ7RTN6 431 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 TXNRD3Q86VQ6 643 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 EBPLQ9BY08 206 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 GBA3Q9H227 469 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 CRTAC1Q9NQ79 661 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 TOR1AO14656 332 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 ECH1Q13011 328 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 PTPRRQ15256 657 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 TANGO2Q6ICL3 276 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 BBS12Q6ZW61 710 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 CMIPQ8IY22 773 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 FANK1Q8TC84 345 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 AGO4Q9HCK5 861 aaKnown RBP13.03□□□□□ -0.32
USP49-203ENST00000394253 LUZP4Q9P127 313 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 FETUBQ9UGM5 382 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 PCDHB11Q9Y5F2 797 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 A0A1W2PS29 197 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 PRPS1L1P21108 318 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 SLC29A4Q7RTT9 530 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 KIAA0895Q8NCT3 520 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 PGLYRP2Q96PD5 576 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 EFCAB11Q9BUY7 163 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 TMEM248Q9NWD8 314 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 KLF15Q9UIH9 416 aa13.03□□□□□ -0.32
USP49-203ENST00000394253 TFP02787 698 aa13.02□□□□□ -0.32
USP49-203ENST00000394253 HEXBP07686 556 aa13.02□□□□□ -0.32
USP49-203ENST00000394253 CD34P28906 385 aa13.02□□□□□ -0.32
USP49-203ENST00000394253 POM121L1PQ3SYA9 428 aa13.02□□□□□ -0.32
USP49-203ENST00000394253 PSD4Q8NDX1 1056 aa13.02□□□□□ -0.32
USP49-203ENST00000394253 OR10R2Q8NGX6 335 aa13.02□□□□□ -0.32
USP49-203ENST00000394253 PTERQ96BW5 349 aa13.02□□□□□ -0.32
USP49-203ENST00000394253 AGO3Q9H9G7 860 aaKnown RBP13.02□□□□□ -0.32
USP49-203ENST00000394253 SPTA1P02549 2419 aa13.02□□□□□ -0.32
USP49-203ENST00000394253 UGGT1Q9NYU2 1555 aa13.02□□□□□ -0.32
USP49-203ENST00000394253 LEPRP48357 1165 aaKnown RBP13.02□□□□□ -0.32
USP49-203ENST00000394253 UPP1Q16831 310 aa13.02□□□□□ -0.32
USP49-203ENST00000394253 PDSS1Q5T2R2 415 aa13.02□□□□□ -0.32
USP49-203ENST00000394253 C19orf35Q6ZS72 473 aa13.02□□□□□ -0.32
USP49-203ENST00000394253 FAM129CQ86XR2 697 aa13.02□□□□□ -0.32
USP49-203ENST00000394253 OR56A1Q8NGH5 318 aa13.02□□□□□ -0.32
USP49-203ENST00000394253 APMAPQ9HDC9 416 aa13.02□□□□□ -0.32
USP49-203ENST00000394253 GCM1Q9NP62 436 aa13.02□□□□□ -0.32
USP49-203ENST00000394253 ABCB8Q9NUT2 735 aa13.02□□□□□ -0.32
USP49-203ENST00000394253 PCDHB14Q9Y5E9 798 aa13.02□□□□□ -0.32
USP49-203ENST00000394253 CLCA3PQ9Y6N3 262 aa13.02□□□□□ -0.32
USP49-203ENST00000394253 PENKP01210 267 aaPredicted RBP13.02□□□□□ -0.32
USP49-203ENST00000394253 GALEQ14376 348 aa13.02□□□□□ -0.32
USP49-203ENST00000394253 RALGPS1Q5JS13 557 aa13.02□□□□□ -0.32
USP49-203ENST00000394253 C3orf67Q6ZVT6 689 aa13.02□□□□□ -0.32
USP49-203ENST00000394253 PDSS2Q86YH6 399 aa13.02□□□□□ -0.32
USP49-203ENST00000394253 HOXB13Q92826 284 aaPredicted RBP13.02□□□□□ -0.32
USP49-203ENST00000394253 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.02□□□□□ -0.32
USP49-203ENST00000394253 DHDHQ9UQ10 334 aa13.02□□□□□ -0.32
USP49-203ENST00000394253 NRCAMQ92823 1304 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 ANKRD31Q8N7Z5 1873 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 KLHL33A6NCF5 533 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 RGL2O15211 777 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 ANKRD13BQ86YJ7 626 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 FAM71AQ8IYT1 594 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 ZNF439Q8NDP4 499 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 MS4A12Q9NXJ0 267 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 MTMR11A4FU01 709 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 OR5H15A6NDH6 313 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 OR5H14A6NHG9 310 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 OR5H1A6NKK0 313 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 ST3GAL3Q11203 375 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 FAM183BPQ6ZVS7 135 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 FAM122AQ96E09 287 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 ZDHHC12Q96GR4 267 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 DUSP26Q9BV47 211 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 TM6SF2Q9BZW4 377 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 MAN2C1Q9NTJ4 1040 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 ZNF446Q9NWS9 450 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 HIF1ANQ9NWT6 349 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 ZNF223Q9UK11 482 aaPredicted RBP13.02□□□□□ -0.33
USP49-203ENST00000394253 ZC3H13Q5T200 1668 aaKnown RBP13.02□□□□□ -0.33
USP49-203ENST00000394253 hCG_1818297A0A087WSY0 165 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 GLI2P10070 1586 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 ZNF182P17025 639 aaPredicted RBP13.02□□□□□ -0.33
USP49-203ENST00000394253 CD53P19397 219 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 IDH3AP50213 366 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 MAB21L3Q8N8X9 362 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 NTAN1Q96AB6 310 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 PCDHGA7Q9Y5G6 932 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 PRAMEF22A3QJZ6 481 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 SEC14L6B5MCN3 397 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 J3QRK9 145 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 CLRN1P58418 232 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 ZNF705AQ6ZN79 300 aaPredicted RBP13.02□□□□□ -0.33
USP49-203ENST00000394253 TMEM199Q8N511 208 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 GRHL3Q8TE85 626 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 DENND1AQ8TEH3 1009 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 SPOCK2Q92563 424 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 FBXL8Q96CD0 374 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 LMLNQ96KR4 655 aa13.02□□□□□ -0.33
USP49-203ENST00000394253 EXTL2Q9UBQ6 330 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms