RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 NANSQ9NR45 359 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 ZNF275Q9NSD4 429 aaPredicted RBP7.38□□□□□ -1.23
VTI1A-201ENST00000393077 TJP2Q9UDY2 1190 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 GIMAP2Q9UG22 337 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 SCP2D1Q9UJQ7 156 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 ELF5Q9UKW6 265 aaPredicted RBP7.38□□□□□ -1.23
VTI1A-201ENST00000393077 TBC1D24Q9ULP9 559 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 C4AP0C0L4 1744 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 ADAMTS7Q9UKP4 1686 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 OR2A25A4D2G3 310 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 TUBAL3A6NHL2 446 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 NCF1BA6NI72 391 aaPredicted RBP7.38□□□□□ -1.23
VTI1A-201ENST00000393077 NCF1CA8MVU1 366 aaPredicted RBP7.38□□□□□ -1.23
VTI1A-201ENST00000393077 H3BQ06 376 aaPredicted RBP7.38□□□□□ -1.23
VTI1A-201ENST00000393077 FZD9O00144 591 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 NCF1P14598 390 aaPredicted RBP7.38□□□□□ -1.23
VTI1A-201ENST00000393077 ZNF30P17039 623 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 RHCEP18577 417 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 OR2T5Q6IEZ7 315 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 SLC25A25Q6KCM7 469 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 TRILQ7L0X0 811 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 CCDC190Q86UF4 302 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 TMEM151AQ8N4L1 468 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 OR2T29Q8NH02 315 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 RPLP0P6Q8NHW5 317 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 UBA3Q8TBC4 463 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 DDX1Q92499 740 aaKnown RBP7.38□□□□□ -1.23
VTI1A-201ENST00000393077 AHCYL2Q96HN2 611 aaKnown RBP7.38□□□□□ -1.23
VTI1A-201ENST00000393077 ZBED3Q96IU2 234 aaPredicted RBP7.38□□□□□ -1.23
VTI1A-201ENST00000393077 ZFP3Q96NJ6 502 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 ASB7Q9H672 318 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 CISHQ9NSE2 258 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 GPRC5BQ9NZH0 403 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 ZNF225Q9UK10 706 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 SLC6A5Q9Y345 797 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 OAS3Q9Y6K5 1087 aaKnown RBP7.38□□□□□ -1.23
VTI1A-201ENST00000393077 CHD4Q14839 1912 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 ZNF705EA8MWA4 302 aaPredicted RBP7.38□□□□□ -1.23
VTI1A-201ENST00000393077 IFRD1O00458 451 aaPredicted RBP7.38□□□□□ -1.23
VTI1A-201ENST00000393077 SPDEFO95238 335 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 INSRRP14616 1297 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 DNAJA1P31689 397 aaKnown RBP7.38□□□□□ -1.23
VTI1A-201ENST00000393077 ATP4BP51164 291 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 PSMA6P60900 246 aaKnown RBP7.38□□□□□ -1.23
VTI1A-201ENST00000393077 GRB14Q14449 540 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 GRB7Q14451 532 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 MAD2L1BPQ15013 274 aaPredicted RBP7.38□□□□□ -1.23
VTI1A-201ENST00000393077 TBCEQ15813 527 aaPredicted RBP7.38□□□□□ -1.23
VTI1A-201ENST00000393077 ETFDHQ16134 617 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 ZMAT1Q5H9K5 638 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 OVOS1Q6IE37 1185 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 WASH2PQ6VEQ5 465 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 RPS27LQ71UM5 84 aaKnown RBP7.38□□□□□ -1.23
VTI1A-201ENST00000393077 ARMCX2Q7L311 632 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 MILR1Q7Z6M3 343 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 RDH10Q8IZV5 341 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 OR4Q3Q8NH05 313 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 ELP5Q8TE02 316 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 STYXQ8WUJ0 223 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 KCNJ9Q92806 393 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 RFT1Q96AA3 541 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 VRK1Q99986 396 aaPredicted RBP7.38□□□□□ -1.23
VTI1A-201ENST00000393077 P2RY13Q9BPV8 354 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 CMSS1Q9BQ75 279 aaKnown RBP7.38□□□□□ -1.23
VTI1A-201ENST00000393077 CDCP1Q9H5V8 836 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 MIOSQ9NXC5 875 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 CLEC4AQ9UMR7 237 aa7.38□□□□□ -1.23
VTI1A-201ENST00000393077 A0A1B0GV90 55 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 OR6C74A6NCV1 312 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 TRABD2BA6NFA1 517 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 CLCA1A8K7I4 914 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 RFXAPO00287 272 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 ARPC5O15511 151 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 SOX30O94993 753 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 SNAPINO95295 136 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 VNN1O95497 513 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 AHSGP02765 367 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 SBK2P0C263 348 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 CKMT1AP12532 417 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 CAPN3P20807 821 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 HOXC5Q00444 222 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 GK2Q14410 553 aaPredicted RBP7.37□□□□□ -1.23
VTI1A-201ENST00000393077 PUM1Q14671 1186 aaKnown RBP eCLIP7.37□□□□□ -1.23
VTI1A-201ENST00000393077 AAK1Q2M2I8 961 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 SAXO2Q658L1 398 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 USP50Q70EL3 339 aaPredicted RBP7.37□□□□□ -1.23
VTI1A-201ENST00000393077 LIX1Q8N485 282 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 C9orf62Q8N4C0 152 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 WDR48Q8TAF3 677 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 SENP8Q96LD8 212 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 FUZQ9BT04 418 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 CACNG6Q9BXT2 260 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 B3GNT5Q9BYG0 378 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 AMBRA1Q9C0C7 1298 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 OR51M1Q9H341 326 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 GPR83Q9NYM4 423 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 HES2Q9Y543 173 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 MYO18AQ92614 2054 aaKnown RBP7.37□□□□□ -1.23
VTI1A-201ENST00000393077 TJP1Q07157 1748 aa7.37□□□□□ -1.23
VTI1A-201ENST00000393077 XIRP1Q702N8 1843 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms