RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 RPL3P39023 403 aaKnown RBP24.53■■□□□ 1.52
SMARCD3-203ENST00000392811 MVDP53602 400 aa24.53■■□□□ 1.52
SMARCD3-203ENST00000392811 FGL2Q14314 439 aa24.53■■□□□ 1.52
SMARCD3-203ENST00000392811 AGERQ15109 404 aa24.53■■□□□ 1.52
SMARCD3-203ENST00000392811 PRSS53Q2L4Q9 553 aa24.53■■□□□ 1.52
SMARCD3-203ENST00000392811 ITPRIPL2Q3MIP1 535 aa24.53■■□□□ 1.52
SMARCD3-203ENST00000392811 DUS1LQ6P1R4 473 aaKnown RBP24.53■■□□□ 1.52
SMARCD3-203ENST00000392811 NUDT18Q6ZVK8 323 aa24.53■■□□□ 1.52
SMARCD3-203ENST00000392811 KLK6Q92876 244 aa24.53■■□□□ 1.52
SMARCD3-203ENST00000392811 RPP25Q9BUL9 199 aaKnown RBP24.53■■□□□ 1.52
SMARCD3-203ENST00000392811 MENTQ9BUN1 341 aa24.53■■□□□ 1.52
SMARCD3-203ENST00000392811 GABARAPL1Q9H0R8 117 aa24.53■■□□□ 1.52
SMARCD3-203ENST00000392811 GPATCH2Q9NW75 528 aa24.53■■□□□ 1.52
SMARCD3-203ENST00000392811 FAF1Q9UNN5 650 aaPredicted RBP24.53■■□□□ 1.52
SMARCD3-203ENST00000392811 ZFR2Q9UPR6 939 aaKnown RBP24.53■■□□□ 1.52
SMARCD3-203ENST00000392811 CKAP5Q14008 2032 aa24.53■■□□□ 1.52
SMARCD3-203ENST00000392811 DOCK9Q9BZ29 2069 aa24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 RFXAPO00287 272 aa24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 GPR37L1O60883 481 aa24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 PAK4O96013 591 aaPredicted RBP24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 CLCNKAP51800 687 aa24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 TPD52P55327 224 aaPredicted RBP24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 PMS2P3Q13401 168 aa24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 DYNC1I2Q13409 638 aaKnown RBP24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 LAPTM4AQ15012 233 aa24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 COX20Q5RI15 118 aa24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 ANGPTL8Q6UXH0 198 aa24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 KCTD8Q6ZWB6 473 aa24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 TPD52L3Q96J77 140 aa24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 ASPSCR1Q9BZE9 553 aa24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 POLR1BQ9H9Y6 1135 aa24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 CUEDC1Q9NWM3 386 aaPredicted RBP24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 RAPGEFL1Q9UHV5 662 aa24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 LOC100130705A0A1B0GUX0 176 aa24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 MYO1GB0I1T2 1018 aa24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 IL3P08700 152 aa24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 SLC35G4P0C7Q5 338 aa24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 IL7RP16871 459 aa24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 AQP1P29972 269 aa24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 RAD23AP54725 363 aa24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 ANKRD54Q6NXT1 300 aa24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 SLC9B2Q86UD5 537 aa24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 CLVS1Q8IUQ0 354 aaPredicted RBP24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 C11orf65Q8NCR3 313 aa24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 SLC35A5Q9BS91 424 aa24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 TRIT1Q9H3H1 467 aaKnown RBP24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 PELI2Q9HAT8 420 aa24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 DDX18Q9NVP1 670 aaKnown RBP24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 BAG5Q9UL15 447 aa24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 ORC6Q9Y5N6 252 aa24.52■■□□□ 1.52
SMARCD3-203ENST00000392811 NUMA1Q14980 2115 aa24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 MITFO75030 526 aaPredicted RBP24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 TRMUO75648 421 aaKnown RBP24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 TBX6O95947 436 aaPredicted RBP24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 TRIM23P36406 574 aa24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 POLR2IP36954 125 aaKnown RBP24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 HSD17B2P37059 387 aa24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 CRATP43155 626 aa24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 CASP9P55211 416 aa24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 SEC13P55735 322 aa24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 RFX4Q33E94 735 aa24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 PPP2R2DQ66LE6 453 aa24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 ZNF773Q6PK81 442 aa24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 CYP4Z1Q86W10 505 aa24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 ELSPBP1Q96BH3 223 aa24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 MTERF3Q96E29 417 aa24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 MCOLN1Q9GZU1 580 aa24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 FUCA1P04066 466 aa24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 ETFAP13804 333 aa24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 EEF1B2P24534 225 aaKnown RBP24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 IGFBP5P24593 272 aa24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 PSMB5P28074 263 aa24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 TPP2P29144 1249 aaPredicted RBP24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 CTU2Q2VPK5 515 aaKnown RBP24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 ZC3H12BQ5HYM0 836 aaKnown RBP24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 RBM48Q5RL73 367 aaKnown RBP24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 HORMAD1Q86X24 394 aa24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 MMP21Q8N119 569 aa24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 TP53I13Q8NBR0 393 aaPredicted RBP24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 CHDHQ8NE62 594 aaPredicted RBP24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 HDAC2Q92769 488 aaKnown RBP24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 ADNPQ9H2P0 1102 aa24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 RHBGQ9H310 441 aa24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 WDR37Q9Y2I8 494 aa24.51■■□□□ 1.51
SMARCD3-203ENST00000392811 RANBP2P49792 3224 aaKnown RBP24.5■■□□□ 1.51
SMARCD3-203ENST00000392811 REV3LO60673 3130 aa24.5■■□□□ 1.51
SMARCD3-203ENST00000392811 GCM2O75603 506 aaPredicted RBP24.5■■□□□ 1.51
SMARCD3-203ENST00000392811 ACP5P13686 325 aa24.5■■□□□ 1.51
SMARCD3-203ENST00000392811 CRHBPP24387 322 aa24.5■■□□□ 1.51
SMARCD3-203ENST00000392811 DNAJA1P31689 397 aaKnown RBP24.5■■□□□ 1.51
SMARCD3-203ENST00000392811 TIE1P35590 1138 aa24.5■■□□□ 1.51
SMARCD3-203ENST00000392811 CYP4F2P78329 520 aa24.5■■□□□ 1.51
SMARCD3-203ENST00000392811 MEP1AQ16819 746 aa24.5■■□□□ 1.51
SMARCD3-203ENST00000392811 TMEM184AQ6ZMB5 413 aa24.5■■□□□ 1.51
SMARCD3-203ENST00000392811 IKBIPQ70UQ0 350 aa24.5■■□□□ 1.51
SMARCD3-203ENST00000392811 PIWIL3Q7Z3Z3 882 aaKnown RBP24.5■■□□□ 1.51
SMARCD3-203ENST00000392811 GALNT5Q7Z7M9 940 aa24.5■■□□□ 1.51
SMARCD3-203ENST00000392811 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.5■■□□□ 1.51
SMARCD3-203ENST00000392811 ANKRD53Q8N9V6 530 aa24.5■■□□□ 1.51
SMARCD3-203ENST00000392811 SMPDL3AQ92484 453 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms