RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 KCNJ13O60928 360 aa18.29■□□□□ 0.52
ERCC2-203ENST00000391944 CTHP32929 405 aa18.29■□□□□ 0.52
ERCC2-203ENST00000391944 DCTP40126 519 aa18.29■□□□□ 0.52
ERCC2-203ENST00000391944 CTBSQ01459 385 aa18.29■□□□□ 0.52
ERCC2-203ENST00000391944 HTR4Q13639 388 aa18.29■□□□□ 0.52
ERCC2-203ENST00000391944 ZIK1Q3SY52 487 aaPredicted RBP18.29■□□□□ 0.52
ERCC2-203ENST00000391944 OFCC1Q8IZS5 231 aa18.29■□□□□ 0.52
ERCC2-203ENST00000391944 RAB42Q8N4Z0 105 aa18.29■□□□□ 0.52
ERCC2-203ENST00000391944 ANKRD53Q8N9V6 530 aa18.29■□□□□ 0.52
ERCC2-203ENST00000391944 LINC01555Q8NAE3 123 aa18.29■□□□□ 0.52
ERCC2-203ENST00000391944 NCSTNQ92542 709 aa18.29■□□□□ 0.52
ERCC2-203ENST00000391944 PITHD1Q9GZP4 211 aaPredicted RBP18.29■□□□□ 0.52
ERCC2-203ENST00000391944 SMURF2Q9HAU4 748 aa18.29■□□□□ 0.52
ERCC2-203ENST00000391944 LMCD1Q9NZU5 365 aa18.29■□□□□ 0.52
ERCC2-203ENST00000391944 PRR19A6NJB7 356 aa18.29■□□□□ 0.52
ERCC2-203ENST00000391944 SEC24DO94855 1032 aaPredicted RBP18.29■□□□□ 0.52
ERCC2-203ENST00000391944 SEMA3DO95025 777 aa18.29■□□□□ 0.52
ERCC2-203ENST00000391944 PSMB5P28074 263 aa18.29■□□□□ 0.52
ERCC2-203ENST00000391944 MPEG1Q2M385 716 aa18.29■□□□□ 0.52
ERCC2-203ENST00000391944 KHDRBS2Q5VWX1 349 aaKnown RBP18.29■□□□□ 0.52
ERCC2-203ENST00000391944 RBM44Q6ZP01 1051 aaKnown RBP18.29■□□□□ 0.52
ERCC2-203ENST00000391944 CBLL1Q75N03 491 aa18.29■□□□□ 0.52
ERCC2-203ENST00000391944 EIF3MQ7L2H7 374 aaKnown RBP18.29■□□□□ 0.52
ERCC2-203ENST00000391944 TBC1D20Q96BZ9 403 aa18.29■□□□□ 0.52
ERCC2-203ENST00000391944 CAMK1GQ96NX5 476 aa18.29■□□□□ 0.52
ERCC2-203ENST00000391944 RBM4BQ9BQ04 359 aaKnown RBP18.29■□□□□ 0.52
ERCC2-203ENST00000391944 APOOQ9BUR5 198 aa18.29■□□□□ 0.52
ERCC2-203ENST00000391944 RBM4Q9BWF3 364 aaKnown RBP18.29■□□□□ 0.52
ERCC2-203ENST00000391944 MS4A8Q9BY19 250 aa18.29■□□□□ 0.52
ERCC2-203ENST00000391944 TUBA8Q9NY65 449 aaPredicted RBP18.29■□□□□ 0.52
ERCC2-203ENST00000391944 KCNK6Q9Y257 313 aa18.29■□□□□ 0.52
ERCC2-203ENST00000391944 TBC1D3DA0A087WVF3 549 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 TBC1D3IA0A087WXS9 549 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 TBC1D3EA0A087X179 549 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 TBC1D3KA0A087X1G2 549 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 TBC1D3FA6NER0 549 aaPredicted RBP18.28■□□□□ 0.52
ERCC2-203ENST00000391944 TRIM64CA6NLI5 447 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 TBC1D3LB9A6J9 549 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 ANHXE9PGG2 379 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 H7BY64 318 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 LATO43561 262 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 SEMG1P04279 462 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 NTRK1P04629 796 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 FESP07332 822 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 NUDT7P0C024 238 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 TBC1D3HP0C7X1 549 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 HOXB2P14652 356 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 COL9A1P20849 921 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 TPP2P29144 1249 aaPredicted RBP18.28■□□□□ 0.52
ERCC2-203ENST00000391944 GSTT1P30711 240 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 SERPINB1P30740 379 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 PEX19P40855 299 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 REEP5Q00765 189 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 TBC1D3GQ6DHY5 549 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 TBC1D3CQ6IPX1 549 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 SPESP1Q6UW49 350 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 TMEM179BQ7Z7N9 219 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 TBC1D3Q8IZP1 549 aaPredicted RBP18.28■□□□□ 0.52
ERCC2-203ENST00000391944 HS3ST5Q8IZT8 346 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 PJA1Q8NG27 643 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 PRAP1Q96NZ9 151 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 GDF15Q99988 308 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 SORBS1Q9BX66 1292 aaKnown RBP18.28■□□□□ 0.52
ERCC2-203ENST00000391944 RBM38Q9H0Z9 239 aaKnown RBP18.28■□□□□ 0.52
ERCC2-203ENST00000391944 PREBQ9HCU5 417 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 PLPP1O14494 284 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 VILLO15195 856 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 C6orf47O95873 294 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 EGFP01133 1207 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 IL3P08700 152 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 ALDH3B2P48448 385 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 MVDP53602 400 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 EPS8Q12929 822 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 BIRC2Q13490 618 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 BORAQ6PGQ7 559 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 EP400NLQ6ZTU2 488 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 HIPK1Q86Z02 1210 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 NAGSQ8N159 534 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 ZFP28Q8NHY6 868 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 CIDECQ96AQ7 238 aaPredicted RBP18.28■□□□□ 0.52
ERCC2-203ENST00000391944 ZNF717Q9BY31 904 aaPredicted RBP18.28■□□□□ 0.52
ERCC2-203ENST00000391944 YTHDF1Q9BYJ9 559 aaKnown RBP18.28■□□□□ 0.52
ERCC2-203ENST00000391944 SCML1Q9UN30 329 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 PLEKHM1Q9Y4G2 1056 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 AP1M2Q9Y6Q5 423 aa18.28■□□□□ 0.52
ERCC2-203ENST00000391944 A0A087WXM4 84 aa18.27■□□□□ 0.52
ERCC2-203ENST00000391944 E2F6O75461 281 aa18.27■□□□□ 0.52
ERCC2-203ENST00000391944 BMP10O95393 424 aa18.27■□□□□ 0.52
ERCC2-203ENST00000391944 KLF8O95600 359 aaPredicted RBP18.27■□□□□ 0.52
ERCC2-203ENST00000391944 MAT2AP31153 395 aaKnown RBP18.27■□□□□ 0.52
ERCC2-203ENST00000391944 RAB28P51157 221 aa18.27■□□□□ 0.52
ERCC2-203ENST00000391944 CDH15P55291 814 aa18.27■□□□□ 0.52
ERCC2-203ENST00000391944 PPP1R8Q12972 351 aaKnown RBP18.27■□□□□ 0.52
ERCC2-203ENST00000391944 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.27■□□□□ 0.52
ERCC2-203ENST00000391944 CCNYL2Q5T2Q4 361 aa18.27■□□□□ 0.52
ERCC2-203ENST00000391944 GALNT10Q86SR1 603 aa18.27■□□□□ 0.52
ERCC2-203ENST00000391944 MUS81Q96NY9 551 aa18.27■□□□□ 0.52
ERCC2-203ENST00000391944 F2RL3Q96RI0 385 aa18.27■□□□□ 0.52
ERCC2-203ENST00000391944 TOR3AQ9H497 397 aa18.27■□□□□ 0.52
ERCC2-203ENST00000391944 IMP3Q9NV31 184 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms