RNA–Protein interactions for RNA: ENST00000384018.1

RNU6-643P-201, Transcript of RNA, U6 small nuclear 643, pseudogene, humanhuman

BASIC

Gene RNU6-643P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-643P-201ENST00000384018 PMELP40967 661 aa0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 GARSP41250 739 aaKnown RBP0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 BRCC3P46736 316 aa0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 FNTAP49354 379 aa0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 CDH13P55290 713 aa0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 CLDN15P56746 228 aa0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 BTG1P62324 171 aa0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 PRKCEQ02156 737 aa0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 RASGEF1BQ0VAM2 473 aa0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 NPTX1Q15818 432 aa0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 ECSCRQ19T08 205 aa0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 CPEB2Q7Z5Q1 589 aaKnown RBP0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 ZNF589Q86UQ0 364 aaPredicted RBP0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 ZNF547Q8IVP9 402 aa0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 ADGRF2Q8IZF7 708 aa0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 CEND1Q8N111 149 aa0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 ZNF433Q8N7K0 673 aaPredicted RBP0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 RFFLQ8WZ73 363 aa0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 HDAC2Q92769 488 aaKnown RBP0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 IL22RA2Q969J5 263 aa0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 LURAP1Q96LR2 239 aa0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 PAFAH2Q99487 392 aa0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 SEPHS2Q99611 448 aa0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 ITPAQ9BY32 194 aa0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 SLC2A11Q9BYW1 496 aa0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 LIME1Q9H400 295 aa0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 KCNK13Q9HB14 408 aa0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 ARHGEF38Q9NXL2 777 aa0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 MTF2Q9Y483 593 aaPredicted RBP0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 COL1A2P08123 1366 aa0.7□□□□□ -2.3
RNU6-643P-201ENST00000384018 IGKV2D-24A0A075B6R9 120 aa0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 IGKV1D-17A0A075B6S4 117 aa0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 IGHV3-35A0A0C4DH35 117 aa0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 LOC390937A0A1W2PQ73 354 aa0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 C17orf51A8MQB3 221 aa0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 A8MVM7 634 aa0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 RAB40ALP0C0E4 278 aa0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 NDST1P52848 882 aa0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 EIF5P55010 431 aaKnown RBP0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 IRF3Q14653 427 aa0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 C17orf58Q2M2W7 97 aa0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 VWC2Q2TAL6 325 aa0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 ZRANB3Q5FWF4 1079 aa0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 SNX30Q5VWJ9 437 aa0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 KRT79Q5XKE5 535 aa0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 REP15Q6BDI9 236 aa0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 NUFIP2Q7Z417 695 aaKnown RBP0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 CCDC60Q8IWA6 550 aaPredicted RBP0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 SLC22A18ASQ8N1D0 253 aa0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 RASGEF1AQ8N9B8 481 aa0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 ADAMTS16Q8TE57 1224 aa0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 PTPMT1Q8WUK0 201 aaPredicted RBP0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 LPGAT1Q92604 370 aa0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 EXOC4Q96A65 974 aa0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 MOB3AQ96BX8 217 aa0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 SAT2Q96F10 170 aaPredicted RBP0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 RCHY1Q96PM5 261 aa0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 IL12RB2Q99665 862 aa0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 ZNF331Q9NQX6 463 aaPredicted RBP0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 PSD3Q9NYI0 1048 aa0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 POLKQ9UBT6 870 aa0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 RNF150Q9ULK6 438 aa0.69□□□□□ -2.3
RNU6-643P-201ENST00000384018 LOC102723996A0A087X1L8 192 aa0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 A0A0U1RQK1 487 aa0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 OR2A25A4D2G3 310 aa0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 CCT8L1PA6NM43 557 aa0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 B4DXG7 233 aa0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 SAP18O00422 153 aaKnown RBP0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 FBP2O00757 339 aa0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 F3P13726 295 aa0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 CD59P13987 128 aa0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 TRIM21P19474 475 aaKnown RBP0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 HMGCLP35914 325 aa0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 ARL3P36405 182 aa0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 LHX1P48742 406 aa0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 EFNA3P52797 238 aa0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 PEX3P56589 373 aa0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 PAX2Q02962 417 aa0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 HSPB3Q12988 150 aa0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 ABRAXAS2Q15018 415 aa0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 NONOQ15233 471 aaKnown RBP eCLIP0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 ARMCX4Q5H9R4 360 aa0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 AGAP6Q5VW22 663 aa0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 OTPQ5XKR4 325 aa0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 KRT39Q6A163 491 aa0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 Q6ZVQ6 151 aa0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 NME8Q8N427 588 aa0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 GUF1Q8N442 669 aaKnown RBP0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 NXNL1Q96CM4 212 aa0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 NXPE2Q96DL1 559 aa0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 SPACA9Q96E40 222 aaPredicted RBP0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 VSIG2Q96IQ7 327 aa0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 C7orf26Q96N11 449 aa0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 ALKBH3Q96Q83 286 aaPredicted RBP0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 CCT8L2Q96SF2 557 aa0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 HSD17B14Q9BPX1 270 aa0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 FTOQ9C0B1 505 aaKnown RBP eCLIP0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 SDCBP2Q9H190 292 aa0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 FNDC4Q9H6D8 234 aaPredicted RBP0.68□□□□□ -2.3
RNU6-643P-201ENST00000384018 PLEKHA3Q9HB20 300 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms