RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 TIGARQ9NQ88 270 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 PRKAB1Q9Y478 270 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 AP1G1O43747 822 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 SLITRK5O94991 958 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 GSTM3P21266 225 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 PPP5CP53041 499 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 RBBP4Q09028 425 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 NCEH1Q6PIU2 408 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 ANKRD13BQ86YJ7 626 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 DCP2Q8IU60 420 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 SLC22A17Q8WUG5 538 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 RAB8BQ92930 207 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 C12orf66Q96MD2 445 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 PHOX2BQ99453 314 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 FARSBQ9NSD9 589 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 DUS2Q9NX74 493 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 TAS2R9Q9NYW1 312 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 SEC14L4Q9UDX3 406 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 TAC3Q9UHF0 121 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 INSL5Q9Y5Q6 135 aa12.29□□□□□ -0.44
DNMT3A-204ENST00000380756 BTAF1O14981 1849 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 TRBV23OR9-2A0A075B6M9 112 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 A0A0U1RQS6 177 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 INPPL1O15357 1258 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 AKAP8O43823 692 aaKnown RBP12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 NT5EP21589 574 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 CMPK1P30085 196 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 SLC6A4P31645 630 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 STK19P49842 368 aaPredicted RBP12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 DOC2AQ14183 400 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 RTP2Q5QGT7 225 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 IDNKQ5T6J7 187 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 KIAA0319Q5VV43 1072 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 DPY19L3Q6ZPD9 716 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 GALNT7Q86SF2 657 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 GALNT13Q8IUC8 556 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 SIX5Q8N196 739 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 SLC5A11Q8WWX8 675 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 SMG7Q92540 1137 aaKnown RBP12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 MAELQ96JY0 434 aaKnown RBP12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 ZFP3Q96NJ6 502 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 BARD1Q99728 777 aaKnown RBP12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 POLR1DQ9Y2S0 133 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 IRAK3Q9Y616 596 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 YES1P07947 543 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 CSNK2A2P19784 350 aaPredicted RBP12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 RYKP34925 604 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 RANBP3LQ86VV4 465 aaPredicted RBP12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 MARCH9Q86YJ5 346 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 SNX33Q8WV41 574 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 TFGQ92734 400 aaPredicted RBP12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 RGMAQ96B86 450 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 NUS1Q96E22 293 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 IGFLR1Q9H665 355 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 HMGN1P05114 100 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 ALPPP05187 535 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 BPIP17213 487 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 TIA1P31483 386 aaKnown RBP eCLIP12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 CD83Q01151 205 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 WSCD2Q2TBF2 565 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 KIAA1324Q6UXG2 1013 aaKnown RBP12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 PRSS48Q7RTY5 328 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 CLECL1Q8IZS7 167 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 TMEM80Q96HE8 168 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 HEBP1Q9NRV9 189 aa12.28□□□□□ -0.44
DNMT3A-204ENST00000380756 RP1L1Q8IWN7 2480 aaPredicted RBP12.27□□□□□ -0.44
DNMT3A-204ENST00000380756 PRAMEF33A0A0G2JMD5 474 aa12.27□□□□□ -0.44
DNMT3A-204ENST00000380756 OR6C70A6NIJ9 312 aa12.27□□□□□ -0.44
DNMT3A-204ENST00000380756 PLOD2O00469 737 aa12.27□□□□□ -0.44
DNMT3A-204ENST00000380756 HCN1O60741 890 aa12.27□□□□□ -0.44
DNMT3A-204ENST00000380756 PRAMEF10O60809 474 aa12.27□□□□□ -0.44
DNMT3A-204ENST00000380756 HSD3B1P14060 373 aa12.27□□□□□ -0.44
DNMT3A-204ENST00000380756 AMD1P17707 334 aa12.27□□□□□ -0.44
DNMT3A-204ENST00000380756 HSD3B2P26439 372 aa12.27□□□□□ -0.44
DNMT3A-204ENST00000380756 FADDQ13158 208 aa12.27□□□□□ -0.44
DNMT3A-204ENST00000380756 FBXO46Q6PJ61 603 aaPredicted RBP12.27□□□□□ -0.44
DNMT3A-204ENST00000380756 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.27□□□□□ -0.44
DNMT3A-204ENST00000380756 LINC00471Q8N535 108 aa12.27□□□□□ -0.44
DNMT3A-204ENST00000380756 TRMT61BQ9BVS5 477 aaKnown RBP12.27□□□□□ -0.44
DNMT3A-204ENST00000380756 DSN1Q9H410 356 aa12.27□□□□□ -0.44
DNMT3A-204ENST00000380756 DIABLOQ9NR28 239 aa12.27□□□□□ -0.44
DNMT3A-204ENST00000380756 MGAT4BQ9UQ53 548 aa12.27□□□□□ -0.44
DNMT3A-204ENST00000380756 HEMK1Q9Y5R4 338 aaPredicted RBP12.27□□□□□ -0.44
DNMT3A-204ENST00000380756 DAPL1A0PJW8 107 aa12.27□□□□□ -0.45
DNMT3A-204ENST00000380756 TSPAN6O43657 245 aa12.27□□□□□ -0.45
DNMT3A-204ENST00000380756 RB1P06400 928 aa12.27□□□□□ -0.45
DNMT3A-204ENST00000380756 SLC35G6P0C7Q6 338 aa12.27□□□□□ -0.45
DNMT3A-204ENST00000380756 MPIP34949 423 aa12.27□□□□□ -0.45
DNMT3A-204ENST00000380756 ZNF140P52738 457 aaPredicted RBP12.27□□□□□ -0.45
DNMT3A-204ENST00000380756 STXBP1P61764 594 aaKnown RBP12.27□□□□□ -0.45
DNMT3A-204ENST00000380756 ABATP80404 500 aa12.27□□□□□ -0.45
DNMT3A-204ENST00000380756 MEF2AQ02078 507 aaPredicted RBP12.27□□□□□ -0.45
DNMT3A-204ENST00000380756 TMEM115Q12893 351 aaPredicted RBP12.27□□□□□ -0.45
DNMT3A-204ENST00000380756 NDUFA9Q16795 377 aa12.27□□□□□ -0.45
DNMT3A-204ENST00000380756 EXOC3L2Q2M3D2 409 aa12.27□□□□□ -0.45
DNMT3A-204ENST00000380756 CCBE1Q6UXH8 406 aaPredicted RBP12.27□□□□□ -0.45
DNMT3A-204ENST00000380756 IGFN1Q86VF2 1251 aa12.27□□□□□ -0.45
DNMT3A-204ENST00000380756 PARGQ86W56 976 aa12.27□□□□□ -0.45
DNMT3A-204ENST00000380756 ALDH16A1Q8IZ83 802 aa12.27□□□□□ -0.45
DNMT3A-204ENST00000380756 OR4C6Q8NH72 309 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms