RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 STARD6P59095 220 aa20.67■□□□□ 0.9
TRIM54-202ENST00000380075 KCNAB2Q13303 367 aa20.67■□□□□ 0.9
TRIM54-202ENST00000380075 SPIDRQ14159 915 aa20.67■□□□□ 0.9
TRIM54-202ENST00000380075 NFE2L1Q14494 772 aa20.67■□□□□ 0.9
TRIM54-202ENST00000380075 TEAD4Q15561 434 aa20.67■□□□□ 0.9
TRIM54-202ENST00000380075 ZNF852Q6ZMS4 543 aa20.67■□□□□ 0.9
TRIM54-202ENST00000380075 DCUN1D3Q8IWE4 304 aa20.67■□□□□ 0.9
TRIM54-202ENST00000380075 SFTPA1Q8IWL2 248 aa20.67■□□□□ 0.9
TRIM54-202ENST00000380075 CHPFQ8IZ52 775 aa20.67■□□□□ 0.9
TRIM54-202ENST00000380075 ZFP90Q8TF47 636 aa20.67■□□□□ 0.9
TRIM54-202ENST00000380075 MTERF3Q96E29 417 aa20.67■□□□□ 0.9
TRIM54-202ENST00000380075 MYNNQ9NPC7 610 aa20.67■□□□□ 0.9
TRIM54-202ENST00000380075 PRSS16Q9NQE7 514 aa20.67■□□□□ 0.9
TRIM54-202ENST00000380075 FZD4Q9ULV1 537 aa20.67■□□□□ 0.9
TRIM54-202ENST00000380075 ERVK-11Q9UQG0 969 aa20.67■□□□□ 0.9
TRIM54-202ENST00000380075 LRRK1Q38SD2 2015 aa20.67■□□□□ 0.9
TRIM54-202ENST00000380075 KIAA1549LQ6ZVL6 1849 aa20.67■□□□□ 0.9
TRIM54-202ENST00000380075 KLHL33A6NCF5 533 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 CPNE6O95741 557 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 ITGAMP11215 1152 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 PCGF2P35227 344 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 HSD17B2P37059 387 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 EIF2DP41214 584 aaKnown RBP20.66■□□□□ 0.9
TRIM54-202ENST00000380075 IL12RB1P42701 662 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 GABARAPL2P60520 117 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 ARHGAP19Q14CB8 494 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 SF1Q15637 639 aaKnown RBP20.66■□□□□ 0.9
TRIM54-202ENST00000380075 PRAMEF14Q5SWL7 426 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 BROXQ5VW32 411 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 PRAMEF13Q5VWM6 474 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 PIWIL3Q7Z3Z3 882 aaKnown RBP20.66■□□□□ 0.9
TRIM54-202ENST00000380075 COMMD6Q7Z4G1 85 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 AMZ2Q86W34 360 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 KRT78Q8N1N4 520 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 METTL4Q8N3J2 472 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 MSANTD3Q96H12 275 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 AMBRA1Q9C0C7 1298 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 SH3BP4Q9P0V3 963 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 NDRG2Q9UN36 371 aaKnown RBP20.66■□□□□ 0.9
TRIM54-202ENST00000380075 ASF1AQ9Y294 204 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 MAN2B1O00754 1011 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 NOBOXO60393 691 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 JUNBP17275 347 aaPredicted RBP20.66■□□□□ 0.9
TRIM54-202ENST00000380075 RXRGP48443 463 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 TSTA3Q13630 321 aaPredicted RBP20.66■□□□□ 0.9
TRIM54-202ENST00000380075 PDE7AQ13946 482 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 RGNQ15493 299 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 ANKRD26P1Q6NSI1 321 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 KCTD8Q6ZWB6 473 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 TMEM179BQ7Z7N9 219 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 DCP2Q8IU60 420 aaKnown RBP20.66■□□□□ 0.9
TRIM54-202ENST00000380075 CLVS1Q8IUQ0 354 aaPredicted RBP20.66■□□□□ 0.9
TRIM54-202ENST00000380075 HS3ST5Q8IZT8 346 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 SHDQ96IW2 340 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 POLR1BQ9H9Y6 1135 aa20.66■□□□□ 0.9
TRIM54-202ENST00000380075 LOC100130705A0A1B0GUX0 176 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 TNFRSF10AO00220 468 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 PDGFBP01127 241 aaPredicted RBP20.65■□□□□ 0.9
TRIM54-202ENST00000380075 EPHX1P07099 455 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 FPR1P21462 350 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 DNAJA1P31689 397 aaKnown RBP20.65■□□□□ 0.9
TRIM54-202ENST00000380075 CNTN1Q12860 1018 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 TMEM196Q5HYL7 178 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 PIP5KL1Q5T9C9 394 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 PNCKQ6P2M8 343 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 IKBIPQ70UQ0 350 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 ARMCX6Q7L4S7 300 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 OXR1Q8N573 874 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 OR4A15Q8NGL6 344 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 EZH1Q92800 747 aaPredicted RBP20.65■□□□□ 0.9
TRIM54-202ENST00000380075 ISOC1Q96CN7 298 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 FOXQ1Q9C009 403 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 TBC1D17Q9HA65 648 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 CXorf21Q9HAI6 301 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 TMEFF2Q9UIK5 374 aaPredicted RBP20.65■□□□□ 0.9
TRIM54-202ENST00000380075 SH2B3Q9UQQ2 575 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 ANTXRLA6NF34 631 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 STK25O00506 426 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 KAT7O95251 611 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 ERGP11308 486 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 CRHBPP24387 322 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 PTX3P26022 381 aaPredicted RBP20.65■□□□□ 0.9
TRIM54-202ENST00000380075 ELK4P28324 431 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 PCSK6P29122 969 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 RYKP34925 604 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 CYP2A13Q16696 494 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 LRRTM4Q86VH4 590 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 C11orf65Q8NCR3 313 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 DOK1Q99704 481 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 ADPRHL2Q9NX46 363 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 TMEM9Q9P0T7 183 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 EXO1Q9UQ84 846 aaKnown RBP20.65■□□□□ 0.9
TRIM54-202ENST00000380075 PCDHGA8Q9Y5G5 932 aa20.65■□□□□ 0.9
TRIM54-202ENST00000380075 GPR89AB7ZAQ6 455 aa20.64■□□□□ 0.89
TRIM54-202ENST00000380075 ABCB7O75027 752 aa20.64■□□□□ 0.89
TRIM54-202ENST00000380075 UGT2B11O75310 529 aa20.64■□□□□ 0.89
TRIM54-202ENST00000380075 FURINP09958 794 aa20.64■□□□□ 0.89
TRIM54-202ENST00000380075 GPR89BP0CG08 455 aa20.64■□□□□ 0.89
TRIM54-202ENST00000380075 IGFBP5P24593 272 aa20.64■□□□□ 0.89
TRIM54-202ENST00000380075 DCKP27707 260 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms