RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 TMEM115Q12893 351 aaPredicted RBP10.5□□□□□ -0.73
BEST1-201ENST00000378043 PPIGQ13427 754 aaKnown RBP eCLIP10.5□□□□□ -0.73
BEST1-201ENST00000378043 TRIM16LQ309B1 348 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 SPIN4Q56A73 249 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 ANXA8L1Q5VT79 327 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 TMPRSS11BQ86T26 416 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 SLC5A8Q8N695 610 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 OR4A15Q8NGL6 344 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 OR4C15Q8NGM1 316 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 IPCEF1Q8WWN9 437 aaPredicted RBP10.5□□□□□ -0.73
BEST1-201ENST00000378043 FAM210AQ96ND0 272 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 RUBCNLQ9H714 662 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 AMBNQ9NP70 447 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 PAK6Q9NQU5 681 aaPredicted RBP10.5□□□□□ -0.73
BEST1-201ENST00000378043 DAPK2Q9UIK4 370 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 KIAA1549LQ6ZVL6 1849 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 M0R082 166 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 ATG13O75143 517 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 MOSPD3O75425 235 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 NPPBP16860 134 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 PPIBP23284 216 aaKnown RBP10.5□□□□□ -0.73
BEST1-201ENST00000378043 CRATP43155 626 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 RECQLP46063 649 aaPredicted RBP10.5□□□□□ -0.73
BEST1-201ENST00000378043 PXNP49023 591 aaPredicted RBP10.5□□□□□ -0.73
BEST1-201ENST00000378043 FADDQ13158 208 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 PTPRSQ13332 1948 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 GRIN2CQ14957 1233 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 INAQ16352 499 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 SYT16Q17RD7 645 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 PRSS53Q2L4Q9 553 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 LY6G5CQ5SRR4 150 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 GOT1L1Q8NHS2 421 aaPredicted RBP10.5□□□□□ -0.73
BEST1-201ENST00000378043 SPPL2AQ8TCT8 520 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 S100ZQ8WXG8 99 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 PROX1Q92786 737 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 CIDECQ96AQ7 238 aaPredicted RBP10.5□□□□□ -0.73
BEST1-201ENST00000378043 TAMM41Q96BW9 452 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 TIFAQ96CG3 184 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 VPS35Q96QK1 796 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 CCM2Q9BSQ5 444 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 COPS4Q9BT78 406 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 ASAH2Q9NR71 780 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 ZNF282Q9UDV7 671 aaPredicted RBP10.5□□□□□ -0.73
BEST1-201ENST00000378043 ATP6V1HQ9UI12 483 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 PSORS1C1Q9UIG5 152 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 OSGIN1Q9UJX0 560 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 TBX21Q9UL17 535 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 PNMA8BQ9ULN7 279 aaPredicted RBP10.5□□□□□ -0.73
BEST1-201ENST00000378043 CORO2BQ9UQ03 480 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 ITM2BQ9Y287 266 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 HCFC2Q9Y5Z7 792 aa10.5□□□□□ -0.73
BEST1-201ENST00000378043 CLDN24A6NM45 220 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 TNFRSF11BO00300 401 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 KPNA4O00629 521 aaPredicted RBP10.49□□□□□ -0.73
BEST1-201ENST00000378043 FGF18O76093 207 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 SYN1P17600 705 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 TGM1P22735 817 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 PBLDP30039 288 aaPredicted RBP10.49□□□□□ -0.73
BEST1-201ENST00000378043 GGT2P36268 569 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 TEAD4Q15561 434 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 CYP27C1Q4G0S4 372 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 IER5LQ5T953 404 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 TMEM220Q6QAJ8 160 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 LIPIQ6XZB0 460 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 COMMD6Q7Z4G1 85 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 KIAA0907Q7Z7F0 614 aaPredicted RBP10.49□□□□□ -0.73
BEST1-201ENST00000378043 ZNF366Q8N895 744 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 KREMEN2Q8NCW0 462 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 OR52J3Q8NH60 311 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 RHOXF1Q8NHV9 184 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 NIPSNAP1Q9BPW8 284 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 TMEM121BQ9BXQ6 578 aaPredicted RBP10.49□□□□□ -0.73
BEST1-201ENST00000378043 SPNS1Q9H2V7 528 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 REEP4Q9H6H4 257 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 SPHK2Q9NRA0 654 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 ACSL6Q9UKU0 697 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.49□□□□□ -0.73
BEST1-201ENST00000378043 KCNE2Q9Y6J6 123 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 RANBP2P49792 3224 aaKnown RBP10.49□□□□□ -0.73
BEST1-201ENST00000378043 SAP18O00422 153 aaKnown RBP10.49□□□□□ -0.73
BEST1-201ENST00000378043 C1orf105O95561 183 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 C6orf47O95873 294 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 MMP12P39900 470 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 MNX1P50219 401 aaPredicted RBP10.49□□□□□ -0.73
BEST1-201ENST00000378043 TBPL1P62380 186 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 EEF1A2Q05639 463 aaKnown RBP10.49□□□□□ -0.73
BEST1-201ENST00000378043 CBX3Q13185 183 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 TEAD2Q15562 447 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 ZNF284Q2VY69 593 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 MED27Q6P2C8 311 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 ANGPTL8Q6UXH0 198 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 DPPA4Q7L190 304 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 ADCK1Q86TW2 530 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 NLRP8Q86W28 1048 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 DNAJC22Q8N4W6 341 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 ZBTB8BQ8NAP8 495 aaPredicted RBP10.49□□□□□ -0.73
BEST1-201ENST00000378043 WDR48Q8TAF3 677 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 AP2M1Q96CW1 435 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 ITPAQ9BY32 194 aa10.49□□□□□ -0.73
BEST1-201ENST00000378043 BHLHE41Q9C0J9 482 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms