RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 JSRP1Q96MG2 331 aaPredicted RBP13.15□□□□□ -0.3
C9orf47-203ENST00000375851 FAM83CQ9BQN1 747 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 SLC2A4RGQ9NR83 387 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 CCM2LQ9NUG4 571 aaPredicted RBP13.15□□□□□ -0.3
C9orf47-203ENST00000375851 ING3Q9NXR8 418 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 PCTPQ9UKL6 214 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 PHF24Q9UPV7 400 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 HCN4Q9Y3Q4 1203 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 BTN3A3O00478 584 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 SLC22A1O15245 554 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 COQ9O75208 318 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 ZNF823P16415 610 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 OR1E2P47887 323 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 TM4SF4P48230 202 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 SMSP52788 366 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 MVKQ03426 396 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 KCNC4Q03721 635 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 RUNX3Q13761 415 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 FBXO46Q6PJ61 603 aaPredicted RBP13.15□□□□□ -0.3
C9orf47-203ENST00000375851 RAB43Q86YS6 212 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 GALNT15Q8N3T1 639 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 SHDQ96IW2 340 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 GINS4Q9BRT9 223 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 IGSF5Q9NSI5 407 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 ERVK-11Q9UQG0 969 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 MED31Q9Y3C7 131 aa13.15□□□□□ -0.3
C9orf47-203ENST00000375851 A0A0U1RQS6 177 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 SMAD6O43541 496 aaKnown RBP13.14□□□□□ -0.31
C9orf47-203ENST00000375851 ARRB1P49407 418 aaPredicted RBP13.14□□□□□ -0.31
C9orf47-203ENST00000375851 HTR6P50406 440 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 ID2Q02363 134 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 CBX3Q13185 183 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 ARMCX6Q7L4S7 300 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 SLC9B2Q86UD5 537 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 CCDC116Q8IYX3 515 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 LMX1AQ8TE12 382 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 NCSTNQ92542 709 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 L3HYPDHQ96EM0 354 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 TRNAU1APQ9NX07 287 aaKnown RBP13.14□□□□□ -0.31
C9orf47-203ENST00000375851 TAS2R7Q9NYW3 318 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 RHCGQ9UBD6 479 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 PTBP2Q9UKA9 531 aaKnown RBP13.14□□□□□ -0.31
C9orf47-203ENST00000375851 SOX14O95416 240 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 CH25HO95992 272 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 IL3P08700 152 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 ACVR2AP27037 513 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 KDELR2P33947 212 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 HTRA3P83110 453 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 GALNT1Q10472 559 aaPredicted RBP13.14□□□□□ -0.31
C9orf47-203ENST00000375851 USP43Q70EL4 1123 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 AKAP14Q86UN6 197 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 MCEMP1Q8IX19 187 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 MEIOBQ8N635 442 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 SLC25A36Q96CQ1 311 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 ZNF689Q96CS4 500 aaPredicted RBP13.14□□□□□ -0.31
C9orf47-203ENST00000375851 MTG2Q9H4K7 406 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 NFKBIL1Q9UBC1 381 aaPredicted RBP13.14□□□□□ -0.31
C9orf47-203ENST00000375851 WASH4PA8MWX3 477 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 CCNKO75909 580 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 FUT4P22083 530 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 ZCCHC12Q6PEW1 402 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 TAS1R1Q7RTX1 841 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 ERI1Q8IV48 349 aaKnown RBP13.14□□□□□ -0.31
C9orf47-203ENST00000375851 CASD1Q96PB1 797 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 NDC1Q9BTX1 674 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 ANKRA2Q9H9E1 313 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 COMMD3Q9UBI1 195 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 ZNF860A6NHJ4 632 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 DRGXA6NNA5 263 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 A8MU76 341 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 TBX1O43435 398 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 TLX2O43763 284 aaPredicted RBP13.14□□□□□ -0.31
C9orf47-203ENST00000375851 TIMP1P01033 207 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 CD2P06729 351 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 NRG3P56975 720 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 ERVPABLB-1P60509 514 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 KIAA1614Q5VZ46 1190 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 DEFB119Q8N690 84 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 WDR92Q96MX6 357 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 BCL2L14Q9BZR8 327 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 PCDHB3Q9Y5E6 796 aa13.14□□□□□ -0.31
C9orf47-203ENST00000375851 CACNA1SQ13698 1873 aa13.13□□□□□ -0.31
C9orf47-203ENST00000375851 EEDO75530 441 aaKnown RBP13.13□□□□□ -0.31
C9orf47-203ENST00000375851 RCBTB2O95199 551 aa13.13□□□□□ -0.31
C9orf47-203ENST00000375851 CD9P21926 228 aa13.13□□□□□ -0.31
C9orf47-203ENST00000375851 SLC6A4P31645 630 aa13.13□□□□□ -0.31
C9orf47-203ENST00000375851 DNASE1L1P49184 302 aa13.13□□□□□ -0.31
C9orf47-203ENST00000375851 KCNAB2Q13303 367 aa13.13□□□□□ -0.31
C9orf47-203ENST00000375851 PRPF38BQ5VTL8 546 aaKnown RBP13.13□□□□□ -0.31
C9orf47-203ENST00000375851 ALKBH2Q6NS38 261 aa13.13□□□□□ -0.31
C9orf47-203ENST00000375851 PIANPQ8IYJ0 282 aa13.13□□□□□ -0.31
C9orf47-203ENST00000375851 ZNF527Q8NB42 609 aa13.13□□□□□ -0.31
C9orf47-203ENST00000375851 NEK7Q8TDX7 302 aa13.13□□□□□ -0.31
C9orf47-203ENST00000375851 PTERQ96BW5 349 aa13.13□□□□□ -0.31
C9orf47-203ENST00000375851 CFL2Q9Y281 166 aa13.13□□□□□ -0.31
C9orf47-203ENST00000375851 PCDHGB7Q9Y5F8 929 aa13.13□□□□□ -0.31
C9orf47-203ENST00000375851 PCDHGA2Q9Y5H1 932 aa13.13□□□□□ -0.31
C9orf47-203ENST00000375851 TLX3O43711 291 aaPredicted RBP13.13□□□□□ -0.31
C9orf47-203ENST00000375851 CST5P28325 142 aaPredicted RBP13.13□□□□□ -0.31
C9orf47-203ENST00000375851 CLDN8P56748 225 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms