RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 KCNE2Q9Y6J6 123 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 QSOX1O00391 747 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 ZNF197O14709 1029 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 KDM1AO60341 852 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 LRG1P02750 347 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 TMED10P49755 219 aaKnown RBP13.99□□□□□ -0.17
MSH5-201ENST00000375703 CTSCP53634 463 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 CDH12P55289 794 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 HBA1P69905 142 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 SPIBQ01892 262 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 PCDH1Q08174 1060 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 LRRC74AQ0VAA2 488 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 TBCEQ15813 527 aaPredicted RBP13.99□□□□□ -0.17
MSH5-201ENST00000375703 IFI44LQ53G44 452 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 ZNF385BQ569K4 471 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 MED27Q6P2C8 311 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 NCCRP1Q6ZVX7 275 aaPredicted RBP13.99□□□□□ -0.17
MSH5-201ENST00000375703 TMC8Q8IU68 726 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 CCDC103Q8IW40 242 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 TRAM1L1Q8N609 369 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 RASGEF1AQ8N9B8 481 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 ERLEC1Q96DZ1 483 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 BHLHE41Q9C0J9 482 aaPredicted RBP13.99□□□□□ -0.17
MSH5-201ENST00000375703 PRDM8Q9NQV8 689 aa13.99□□□□□ -0.17
MSH5-201ENST00000375703 EXO1Q9UQ84 846 aaKnown RBP13.99□□□□□ -0.17
MSH5-201ENST00000375703 NEDD8-MDP1E9PL57 170 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 AQP9O43315 295 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 CD40LGP29965 261 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 PRIM2P49643 509 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 NUDT6P53370 316 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 DCDC1P59894 354 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 MICAQ29983 383 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 DSG4Q86SJ6 1040 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 UTP15Q8TED0 518 aaKnown RBP13.98□□□□□ -0.17
MSH5-201ENST00000375703 BTN2A2Q8WVV5 523 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 NEIL2Q969S2 332 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 FOPNLQ96NB1 174 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 NIPSNAP1Q9BPW8 284 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 REEP4Q9H6H4 257 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 RAD18Q9NS91 495 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 MAFFQ9ULX9 164 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 POFUT2Q9Y2G5 429 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 PCDHGA2Q9Y5H1 932 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 TGM5O43548 720 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 ATG13O75143 517 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 GBAP04062 536 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 STSP08842 583 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 DBTP11182 482 aaKnown RBP13.98□□□□□ -0.17
MSH5-201ENST00000375703 PABPC1P11940 636 aaKnown RBP13.98□□□□□ -0.17
MSH5-201ENST00000375703 PXNP49023 591 aaPredicted RBP13.98□□□□□ -0.17
MSH5-201ENST00000375703 MVDP53602 400 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 ATN1P54259 1190 aaPredicted RBP13.98□□□□□ -0.17
MSH5-201ENST00000375703 ARSIQ5FYB1 569 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 HENMT1Q5T8I9 393 aaKnown RBP13.98□□□□□ -0.17
MSH5-201ENST00000375703 TMPRSS11BQ86T26 416 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 STX19Q8N4C7 294 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 KIAA1958Q8N8K9 716 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 ZNF675Q8TD23 568 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 HPS1Q92902 700 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 TCF25Q9BQ70 676 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 HEPHQ9BQS7 1158 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 SLC35A5Q9BS91 424 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 CCM2Q9BSQ5 444 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 ZSCAN5AQ9BUG6 496 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 ABCB10Q9NRK6 738 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 GPR83Q9NYM4 423 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 ATP6V1HQ9UI12 483 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 ZNF229Q9UJW7 825 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 CCL26Q9Y258 94 aa13.98□□□□□ -0.17
MSH5-201ENST00000375703 WASH3PC4AMC7 463 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 NPC1O15118 1278 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 TNFRSF21O75509 655 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 LEFTY1O75610 366 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 C6orf47O95873 294 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 ZNF8P17098 575 aaPredicted RBP13.97□□□□□ -0.17
MSH5-201ENST00000375703 PTX3P26022 381 aaPredicted RBP13.97□□□□□ -0.17
MSH5-201ENST00000375703 PDHA2P29803 388 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 TSTA3Q13630 321 aaPredicted RBP13.97□□□□□ -0.17
MSH5-201ENST00000375703 SCARB2Q14108 478 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 EXOC3L2Q2M3D2 409 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 ZNF284Q2VY69 593 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 CYP27C1Q4G0S4 372 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 GCNT6Q5T4J0 391 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 SLCO4C1Q6ZQN7 724 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 USP43Q70EL4 1123 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 OTOP2Q7RTS6 562 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 KLHDC8AQ8IYD2 350 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 LGI4Q8N135 537 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 OR4C15Q8NGM1 316 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 NFKBIDQ8NI38 313 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 SAMD11Q96NU1 681 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 C6orf62Q9GZU0 229 aaPredicted RBP13.97□□□□□ -0.17
MSH5-201ENST00000375703 FKBP14Q9NWM8 211 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 ZNF226Q9NYT6 803 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 SLC5A10A0PJK1 596 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 TRIM43BA6NCK2 446 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 METTL15A6NJ78 407 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 RPLP0P05388 317 aaKnown RBP13.97□□□□□ -0.17
MSH5-201ENST00000375703 TIMP2P16035 220 aa13.97□□□□□ -0.17
MSH5-201ENST00000375703 ITGA2P17301 1181 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms