RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 PEX13Q92968 403 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 COQ8BQ96D53 544 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 OR51B5Q9H339 312 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 ZNF624Q9P2J8 865 aaPredicted RBP13.25□□□□□ -0.29
MCF2L-204ENST00000375608 NLKQ9UBE8 527 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 CLEC2DQ9UHP7 191 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 OSGIN1Q9UJX0 560 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 OARD1Q9Y530 152 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 A0A0G2JN53 185 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 A0A1B0GVC2 190 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 A6NIN4 97 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 ARHGAP33O14559 1287 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 SMAD6O43541 496 aaKnown RBP13.25□□□□□ -0.29
MCF2L-204ENST00000375608 CELF2O95319 508 aaKnown RBP13.25□□□□□ -0.29
MCF2L-204ENST00000375608 CD72P21854 359 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 SPAM1P38567 509 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 ZSWIM7Q19AV6 140 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 BTBD16Q32M84 506 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 DDI2Q5TDH0 399 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 TUBA3EQ6PEY2 450 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 RNF130Q86XS8 419 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 SCAMP4Q969E2 229 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 FRMD6Q96NE9 622 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 WACQ9BTA9 647 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 ZNF717Q9BY31 904 aaPredicted RBP13.25□□□□□ -0.29
MCF2L-204ENST00000375608 NDRG4Q9ULP0 352 aaKnown RBP13.25□□□□□ -0.29
MCF2L-204ENST00000375608 SLC6A14Q9UN76 642 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 KDELR3O43731 214 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 TARDBPQ13148 414 aaKnown RBP eCLIP13.25□□□□□ -0.29
MCF2L-204ENST00000375608 GCNT6Q5T4J0 391 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 ADNP2Q6IQ32 1131 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 SERPINA13PQ6UXR4 307 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 ELMOD1Q8N336 334 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 GTF3C2Q8WUA4 911 aaPredicted RBP13.25□□□□□ -0.29
MCF2L-204ENST00000375608 SNAPC3Q92966 411 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 DOHHQ9BU89 302 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 SLC22A4Q9H015 551 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 BEX1Q9HBH7 125 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 NKIRAS2Q9NYR9 191 aa13.25□□□□□ -0.29
MCF2L-204ENST00000375608 RGPD3A6NKT7 1758 aaPredicted RBP13.24□□□□□ -0.29
MCF2L-204ENST00000375608 RGPD4Q7Z3J3 1758 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 CH25HO95992 272 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 IFNW1P05000 195 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 IGFBP1P08833 259 aaPredicted RBP13.24□□□□□ -0.29
MCF2L-204ENST00000375608 CLEC2LP0C7M8 214 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 CHRNB1P11230 501 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 HNF1BP35680 557 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 PREPP48147 710 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 CXCR4P61073 352 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 MC1RQ01726 317 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 GRB14Q14449 540 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 UGT8Q16880 541 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 CDH24Q86UP0 819 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 AMIGO1Q86WK6 493 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 CHPFQ8IZ52 775 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 C2orf69Q8N8R5 385 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 PPCDCQ96CD2 204 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 KLHL1Q9NR64 748 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 PSORS1C1Q9UIG5 152 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 POFUT2Q9Y2G5 429 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 A0A1W2PQL4 384 aaPredicted RBP13.24□□□□□ -0.29
MCF2L-204ENST00000375608 WASH4PA8MWX3 477 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 BTN3A3O00478 584 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 DSCR3O14972 297 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 AREL1O15033 823 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 HOXC11O43248 304 aaPredicted RBP13.24□□□□□ -0.29
MCF2L-204ENST00000375608 HOXA9P31269 272 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 GGT2P36268 569 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 CCT3P49368 545 aaKnown RBP13.24□□□□□ -0.29
MCF2L-204ENST00000375608 ACVR1Q04771 509 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 PTGES3Q15185 160 aaKnown RBP13.24□□□□□ -0.29
MCF2L-204ENST00000375608 CLEC12AQ5QGZ9 265 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 AFMIDQ63HM1 303 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 CAPN13Q6MZZ7 669 aaPredicted RBP13.24□□□□□ -0.29
MCF2L-204ENST00000375608 LIMS2Q7Z4I7 341 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 CCDC71Q8IV32 467 aaPredicted RBP13.24□□□□□ -0.29
MCF2L-204ENST00000375608 XAGE5Q8WWM1 108 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 FOPNLQ96NB1 174 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 TLR4O00206 839 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 ASGR1P07306 291 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 SERPINA4P29622 427 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 CLCN4P51793 760 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 CSNK2BP67870 215 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 SNAPC1Q16533 368 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 POLR2J3Q9H1A7 115 aaKnown RBP13.24□□□□□ -0.29
MCF2L-204ENST00000375608 FNIP2Q9P278 1114 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 SPATA2Q9UM82 520 aa13.24□□□□□ -0.29
MCF2L-204ENST00000375608 SLC38A8A6NNN8 435 aa13.23□□□□□ -0.29
MCF2L-204ENST00000375608 B4GALT3O60512 393 aa13.23□□□□□ -0.29
MCF2L-204ENST00000375608 WISP3O95389 354 aaPredicted RBP13.23□□□□□ -0.29
MCF2L-204ENST00000375608 IFNA14P01570 189 aa13.23□□□□□ -0.29
MCF2L-204ENST00000375608 IL7P13232 177 aa13.23□□□□□ -0.29
MCF2L-204ENST00000375608 BPIP17213 487 aa13.23□□□□□ -0.29
MCF2L-204ENST00000375608 HMGCLP35914 325 aa13.23□□□□□ -0.29
MCF2L-204ENST00000375608 RPS19P39019 145 aaKnown RBP13.23□□□□□ -0.29
MCF2L-204ENST00000375608 CDK6Q00534 326 aa13.23□□□□□ -0.29
MCF2L-204ENST00000375608 SPHARQ15513 63 aa13.23□□□□□ -0.29
MCF2L-204ENST00000375608 TRMT11Q7Z4G4 463 aaKnown RBP13.23□□□□□ -0.29
MCF2L-204ENST00000375608 GLCCI1Q86VQ1 547 aa13.23□□□□□ -0.29
MCF2L-204ENST00000375608 NPAS3Q8IXF0 933 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms