RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 SKP1P63208 163 aa13.92□□□□□ -0.18
CDKN1A-202ENST00000373711 YBX1P67809 324 aaKnown RBP13.92□□□□□ -0.18
CDKN1A-202ENST00000373711 MEF2AQ02078 507 aaPredicted RBP13.92□□□□□ -0.18
CDKN1A-202ENST00000373711 THEMIS2Q5TEJ8 643 aa13.92□□□□□ -0.18
CDKN1A-202ENST00000373711 C8orf74Q6P047 294 aa13.92□□□□□ -0.18
CDKN1A-202ENST00000373711 MAATS1Q7Z4T9 603 aa13.92□□□□□ -0.18
CDKN1A-202ENST00000373711 CAMKVQ8NCB2 501 aa13.92□□□□□ -0.18
CDKN1A-202ENST00000373711 PLPP5Q8NEB5 264 aa13.92□□□□□ -0.18
CDKN1A-202ENST00000373711 OR5M3Q8NGP4 307 aa13.92□□□□□ -0.18
CDKN1A-202ENST00000373711 THAP11Q96EK4 314 aa13.92□□□□□ -0.18
CDKN1A-202ENST00000373711 SEC16BQ96JE7 1060 aa13.92□□□□□ -0.18
CDKN1A-202ENST00000373711 FAM129AQ9BZQ8 928 aa13.92□□□□□ -0.18
CDKN1A-202ENST00000373711 P2RY12Q9H244 342 aa13.92□□□□□ -0.18
CDKN1A-202ENST00000373711 DLL4Q9NR61 685 aa13.92□□□□□ -0.18
CDKN1A-202ENST00000373711 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.92□□□□□ -0.18
CDKN1A-202ENST00000373711 DMGDHQ9UI17 866 aaKnown RBP13.92□□□□□ -0.18
CDKN1A-202ENST00000373711 TCAF1Q9Y4C2 921 aa13.92□□□□□ -0.18
CDKN1A-202ENST00000373711 V9GYY5 206 aaPredicted RBP13.92□□□□□ -0.18
CDKN1A-202ENST00000373711 ZNF407Q9C0G0 2248 aa13.92□□□□□ -0.18
CDKN1A-202ENST00000373711 RHOXF2BP0C7M4 288 aa13.91□□□□□ -0.18
CDKN1A-202ENST00000373711 IL1RNP18510 177 aa13.91□□□□□ -0.18
CDKN1A-202ENST00000373711 JAK1P23458 1154 aa13.91□□□□□ -0.18
CDKN1A-202ENST00000373711 IVDP26440 423 aa13.91□□□□□ -0.18
CDKN1A-202ENST00000373711 TRHRP34981 398 aaPredicted RBP13.91□□□□□ -0.18
CDKN1A-202ENST00000373711 FDFT1P37268 417 aa13.91□□□□□ -0.18
CDKN1A-202ENST00000373711 VPS41P49754 854 aa13.91□□□□□ -0.18
CDKN1A-202ENST00000373711 ST13P50502 369 aaKnown RBP13.91□□□□□ -0.18
CDKN1A-202ENST00000373711 HLCSP50747 726 aa13.91□□□□□ -0.18
CDKN1A-202ENST00000373711 DGKQP52824 942 aa13.91□□□□□ -0.18
CDKN1A-202ENST00000373711 ITGA8P53708 1063 aa13.91□□□□□ -0.18
CDKN1A-202ENST00000373711 MPP1Q00013 466 aa13.91□□□□□ -0.18
CDKN1A-202ENST00000373711 LTBQ06643 244 aa13.91□□□□□ -0.18
CDKN1A-202ENST00000373711 PPP1R7Q15435 360 aa13.91□□□□□ -0.18
CDKN1A-202ENST00000373711 TRADDQ15628 312 aa13.91□□□□□ -0.18
CDKN1A-202ENST00000373711 GLE1Q53GS7 698 aaKnown RBP13.91□□□□□ -0.18
CDKN1A-202ENST00000373711 RNF187Q5TA31 235 aaPredicted RBP13.91□□□□□ -0.18
CDKN1A-202ENST00000373711 LDB1Q86U70 411 aaPredicted RBP13.91□□□□□ -0.18
CDKN1A-202ENST00000373711 OTUD6BQ8N6M0 293 aa13.91□□□□□ -0.18
CDKN1A-202ENST00000373711 AMER2Q8N7J2 671 aa13.91□□□□□ -0.18
CDKN1A-202ENST00000373711 GOT1L1Q8NHS2 421 aaPredicted RBP13.91□□□□□ -0.18
CDKN1A-202ENST00000373711 C16orf52Q8NHV5 167 aa13.91□□□□□ -0.18
CDKN1A-202ENST00000373711 ELP5Q8TE02 316 aa13.91□□□□□ -0.18
CDKN1A-202ENST00000373711 RHOXF2Q9BQY4 288 aa13.91□□□□□ -0.18
CDKN1A-202ENST00000373711 SARGQ9BW04 601 aa13.91□□□□□ -0.18
CDKN1A-202ENST00000373711 CLEC4MQ9H2X3 399 aaPredicted RBP13.91□□□□□ -0.18
CDKN1A-202ENST00000373711 GSX1Q9H4S2 264 aaPredicted RBP13.91□□□□□ -0.18
CDKN1A-202ENST00000373711 FIGNL2A6NMB9 653 aa13.9□□□□□ -0.18
CDKN1A-202ENST00000373711 ARHGEF33A8MVX0 844 aa13.9□□□□□ -0.18
CDKN1A-202ENST00000373711 ACOT7O00154 380 aa13.9□□□□□ -0.18
CDKN1A-202ENST00000373711 SMAPO00193 183 aa13.9□□□□□ -0.18
CDKN1A-202ENST00000373711 HS6ST1O60243 411 aa13.9□□□□□ -0.18
CDKN1A-202ENST00000373711 PSIP1O75475 530 aaKnown RBP13.9□□□□□ -0.18
CDKN1A-202ENST00000373711 CTAG2O75638 210 aa13.9□□□□□ -0.18
CDKN1A-202ENST00000373711 NUP107P57740 925 aa13.9□□□□□ -0.18
CDKN1A-202ENST00000373711 PMPCAQ10713 525 aa13.9□□□□□ -0.18
CDKN1A-202ENST00000373711 ERCC6LQ2NKX8 1250 aa13.9□□□□□ -0.18
CDKN1A-202ENST00000373711 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.9□□□□□ -0.18
CDKN1A-202ENST00000373711 TMEM214Q6NUQ4 689 aaKnown RBP13.9□□□□□ -0.18
CDKN1A-202ENST00000373711 NIPAL1Q6NVV3 410 aa13.9□□□□□ -0.18
CDKN1A-202ENST00000373711 SYDE1Q6ZW31 735 aaPredicted RBP13.9□□□□□ -0.18
CDKN1A-202ENST00000373711 CCDC71Q8IV32 467 aaPredicted RBP13.9□□□□□ -0.18
CDKN1A-202ENST00000373711 CCDC89Q8N998 374 aa13.9□□□□□ -0.18
CDKN1A-202ENST00000373711 TRIM31Q9BZY9 425 aa13.9□□□□□ -0.18
CDKN1A-202ENST00000373711 SYNPO2LQ9H987 977 aa13.9□□□□□ -0.18
CDKN1A-202ENST00000373711 PLSCR2Q9NRY7 297 aa13.9□□□□□ -0.18
CDKN1A-202ENST00000373711 TSR3Q9UJK0 312 aaKnown RBP13.9□□□□□ -0.18
CDKN1A-202ENST00000373711 RPH3AQ9Y2J0 694 aaPredicted RBP13.9□□□□□ -0.18
CDKN1A-202ENST00000373711 KCNE1BA0A087WTH5 132 aa13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 FAM47E-STBD1D6RA91 191 aa13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 SGK494L7N484 410 aa13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 PEX1O43933 1283 aa13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 RPL21P46778 160 aaKnown RBP13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 ZFP36L2P47974 494 aaKnown RBP13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 TERF1P54274 439 aa13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 MLF1P58340 268 aa13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 RHAGQ02094 409 aa13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 GPS1Q13098 491 aa13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 TTLL9Q3SXZ7 439 aa13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 CMPK2Q5EBM0 449 aa13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 ZNF468Q5VIY5 522 aaPredicted RBP13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 DUPD1Q68J44 220 aa13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 SDCCAG8Q86SQ7 713 aaPredicted RBP13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 PLD3Q8IV08 490 aa13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 SULF2Q8IWU5 870 aa13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 CYP4Z2PQ8N1L4 340 aa13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 ZFP62Q8NB50 900 aaPredicted RBP13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 OR10Q1Q8NGQ4 319 aa13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 CREB3L4Q8TEY5 395 aa13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 MBD6Q96DN6 1003 aa13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 LRRC46Q96FV0 321 aa13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 ZNF778Q96MU6 729 aa13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 PKP4Q99569 1192 aa13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 ERP44Q9BS26 406 aa13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 DPH5Q9H2P9 285 aa13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 ABCF3Q9NUQ8 709 aa13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 TMEM184CQ9NVA4 438 aa13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 PAK5Q9P286 719 aa13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 MARCH4Q9P2E8 410 aaPredicted RBP13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 SNX24Q9Y343 169 aa13.89□□□□□ -0.19
CDKN1A-202ENST00000373711 L3MBTL1Q9Y468 752 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms