RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 GHDCQ8N2G8 530 aa17.02■□□□□ 0.32
TRAF3IP1-201ENST00000373327 OR5AR1Q8NGP9 310 aa17.02■□□□□ 0.32
TRAF3IP1-201ENST00000373327 KCNK12Q9HB15 430 aa17.02■□□□□ 0.32
TRAF3IP1-201ENST00000373327 FAM120CQ9NX05 1096 aaKnown RBP17.02■□□□□ 0.32
TRAF3IP1-201ENST00000373327 PHF24Q9UPV7 400 aa17.02■□□□□ 0.32
TRAF3IP1-201ENST00000373327 RP1L1Q8IWN7 2480 aaPredicted RBP17.02■□□□□ 0.32
TRAF3IP1-201ENST00000373327 NME6O75414 186 aaPredicted RBP17.02■□□□□ 0.31
TRAF3IP1-201ENST00000373327 SNX4O95219 450 aa17.02■□□□□ 0.31
TRAF3IP1-201ENST00000373327 RYKP34925 604 aa17.02■□□□□ 0.31
TRAF3IP1-201ENST00000373327 SUOXP51687 545 aa17.02■□□□□ 0.31
TRAF3IP1-201ENST00000373327 DSTNP60981 165 aa17.02■□□□□ 0.31
TRAF3IP1-201ENST00000373327 LASP1Q14847 261 aaKnown RBP17.02■□□□□ 0.31
TRAF3IP1-201ENST00000373327 KIAA1614Q5VZ46 1190 aa17.02■□□□□ 0.31
TRAF3IP1-201ENST00000373327 WDR48Q8TAF3 677 aa17.02■□□□□ 0.31
TRAF3IP1-201ENST00000373327 RPL3LQ92901 407 aaKnown RBP17.02■□□□□ 0.31
TRAF3IP1-201ENST00000373327 CXorf40BQ96DE9 158 aa17.02■□□□□ 0.31
TRAF3IP1-201ENST00000373327 CCNB1IP1Q9NPC3 277 aa17.02■□□□□ 0.31
TRAF3IP1-201ENST00000373327 GABRR3A8MPY1 467 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 VLDLRP98155 873 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 EXOC3L2Q2M3D2 409 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 XKR7Q5GH72 579 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 CENPSQ8N2Z9 138 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 OR9A1PQ8NGU1 263 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 SNTG1Q9NSN8 517 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 DNAAF2Q9NVR5 837 aaKnown RBP17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 ABCD2Q9UBJ2 740 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 GULP1Q9UBP9 304 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 PDPK1O15530 556 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 SERPINB7O75635 380 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 NFATC1O95644 943 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 ALPLP05186 524 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 ZNF30P17039 623 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 OLIG3Q7RTU3 272 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 RASGEF1AQ8N9B8 481 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 MFSD2AQ8NA29 543 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 OR2A12Q8NGT7 310 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 CAPSLQ8WWF8 208 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 GAB3Q8WWW8 586 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 USP7Q93009 1102 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 ZNF607Q96SK3 696 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 EFCAB11Q9BUY7 163 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 P2RY12Q9H244 342 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 TM9SF3Q9HD45 589 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 DCAF13Q9NV06 445 aaKnown RBP17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 ZNF638Q14966 1978 aaKnown RBP17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 FAM25AB3EWG3 89 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 FAM25CB3EWG5 89 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 FAM25GB3EWG6 89 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 GNB5O14775 395 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 ACPPP15309 386 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 AMD1P17707 334 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 NCBP2P52298 156 aaKnown RBP eCLIP17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 WDR5P61964 334 aaKnown RBP17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 TEAD4Q15561 434 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 CEP68Q76N32 757 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 SLC5A8Q8N695 610 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 ASB11Q8WXH4 323 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 HDAC2Q92769 488 aaKnown RBP17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 QRFPRQ96P65 431 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 POLR2J3Q9H1A7 115 aaKnown RBP17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 GPR83Q9NYM4 423 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 SLC25A37Q9NYZ2 338 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 MRPS7Q9Y2R9 242 aaKnown RBP17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 SLC35F4A4IF30 521 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 H0YAE9 185 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 C6P13671 934 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 TIA1P31483 386 aaKnown RBP eCLIP17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 CCR4P51679 360 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 BMXP51813 675 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 SPARTQ8N0X7 666 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 HERC2P3Q9BVR0 1158 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 TMED5Q9Y3A6 229 aa17.01■□□□□ 0.31
TRAF3IP1-201ENST00000373327 LOC110117498-PIK3R3F6TDL0 507 aa17■□□□□ 0.31
TRAF3IP1-201ENST00000373327 AP2A2O94973 939 aa17■□□□□ 0.31
TRAF3IP1-201ENST00000373327 CD247P20963 164 aa17■□□□□ 0.31
TRAF3IP1-201ENST00000373327 PSMB5P28074 263 aa17■□□□□ 0.31
TRAF3IP1-201ENST00000373327 NRIP1P48552 1158 aa17■□□□□ 0.31
TRAF3IP1-201ENST00000373327 HEPACAMQ14CZ8 416 aa17■□□□□ 0.31
TRAF3IP1-201ENST00000373327 CPA6Q8N4T0 437 aa17■□□□□ 0.31
TRAF3IP1-201ENST00000373327 CLMPQ9H6B4 373 aa17■□□□□ 0.31
TRAF3IP1-201ENST00000373327 CACNA1IQ9P0X4 2223 aa17■□□□□ 0.31
TRAF3IP1-201ENST00000373327 PIKFYVEQ9Y2I7 2098 aa17■□□□□ 0.31
TRAF3IP1-201ENST00000373327 IGLON5A6NGN9 336 aa17■□□□□ 0.31
TRAF3IP1-201ENST00000373327 ATP6V1G1O75348 118 aa17■□□□□ 0.31
TRAF3IP1-201ENST00000373327 C21orf33P30042 268 aaPredicted RBP17■□□□□ 0.31
TRAF3IP1-201ENST00000373327 CENPAP49450 140 aa17■□□□□ 0.31
TRAF3IP1-201ENST00000373327 NPRL3Q12980 569 aa17■□□□□ 0.31
TRAF3IP1-201ENST00000373327 TCTN1Q2MV58 587 aa17■□□□□ 0.31
TRAF3IP1-201ENST00000373327 SPIN4Q56A73 249 aa17■□□□□ 0.31
TRAF3IP1-201ENST00000373327 FAIM2Q9BWQ8 316 aa17■□□□□ 0.31
TRAF3IP1-201ENST00000373327 MBD1Q9UIS9 605 aaPredicted RBP17■□□□□ 0.31
TRAF3IP1-201ENST00000373327 PCDHB11Q9Y5F2 797 aa17■□□□□ 0.31
TRAF3IP1-201ENST00000373327 ZNF860A6NHJ4 632 aa17■□□□□ 0.31
TRAF3IP1-201ENST00000373327 H0YJX3 145 aa17■□□□□ 0.31
TRAF3IP1-201ENST00000373327 J3KTA2 159 aa17■□□□□ 0.31
TRAF3IP1-201ENST00000373327 CBFA2T3O75081 653 aa17■□□□□ 0.31
TRAF3IP1-201ENST00000373327 RASGRP1O95267 797 aa17■□□□□ 0.31
TRAF3IP1-201ENST00000373327 PIM1P11309 404 aaPredicted RBP17■□□□□ 0.31
TRAF3IP1-201ENST00000373327 SLC6A11P48066 632 aa17■□□□□ 0.31
TRAF3IP1-201ENST00000373327 RNASE12Q5GAN4 147 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms