RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 MVDP53602 400 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 C11orf91Q3C1V1 193 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 KDM4DQ6B0I6 523 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 PDZD3Q86UT5 571 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 MMP21Q8N119 569 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 BPIFB6Q8NFQ5 453 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 PPCDCQ96CD2 204 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 CXorf40BQ96DE9 158 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 COX14Q96I36 57 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 SLC35A5Q9BS91 424 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 TMEM121BQ9BXQ6 578 aaPredicted RBP17.97■□□□□ 0.47
USP49-202ENST00000373010 PAK1IP1Q9NWT1 392 aaPredicted RBP17.97■□□□□ 0.47
USP49-202ENST00000373010 SIRT5Q9NXA8 310 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 SPASTQ9UBP0 616 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 CORO2BQ9UQ03 480 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 PLXND1Q9Y4D7 1925 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 TRPM6Q9BX84 2022 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 TMEM229AB2RXF0 380 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 PTGES3LE9PB15 166 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 FCARP24071 287 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 CALRP27797 417 aaKnown RBP17.97■□□□□ 0.47
USP49-202ENST00000373010 CLK3P49761 638 aaKnown RBP17.97■□□□□ 0.47
USP49-202ENST00000373010 KCNJ10P78508 379 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 CDK5R2Q13319 367 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 NUMA1Q14980 2115 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 IQCCQ4KMZ1 466 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 PIP5KL1Q5T9C9 394 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 EGFLAMQ63HQ2 1017 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 FAM71E1Q6IPT2 247 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 UNC5DQ6UXZ4 953 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 AMZ2Q86W34 360 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 METTL4Q8N3J2 472 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 C7orf34Q96L11 122 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 SPATA9Q9BWV2 254 aa17.97■□□□□ 0.47
USP49-202ENST00000373010 SUV39H1O43463 412 aa17.96■□□□□ 0.47
USP49-202ENST00000373010 PI15O43692 258 aa17.96■□□□□ 0.47
USP49-202ENST00000373010 XPNPEP2O43895 674 aa17.96■□□□□ 0.47
USP49-202ENST00000373010 SEC14L2O76054 403 aa17.96■□□□□ 0.47
USP49-202ENST00000373010 OPN1SWP03999 348 aa17.96■□□□□ 0.47
USP49-202ENST00000373010 GSTM2P28161 218 aa17.96■□□□□ 0.47
USP49-202ENST00000373010 ITGA1P56199 1179 aa17.96■□□□□ 0.47
USP49-202ENST00000373010 NUP107P57740 925 aa17.96■□□□□ 0.47
USP49-202ENST00000373010 FGD3Q5JSP0 725 aa17.96■□□□□ 0.47
USP49-202ENST00000373010 PNCKQ6P2M8 343 aa17.96■□□□□ 0.47
USP49-202ENST00000373010 TMIGD1Q6UXZ0 262 aa17.96■□□□□ 0.47
USP49-202ENST00000373010 DSG4Q86SJ6 1040 aa17.96■□□□□ 0.47
USP49-202ENST00000373010 C11orf65Q8NCR3 313 aa17.96■□□□□ 0.47
USP49-202ENST00000373010 OR5AK3PQ8NH89 298 aa17.96■□□□□ 0.47
USP49-202ENST00000373010 TFGQ92734 400 aaPredicted RBP17.96■□□□□ 0.47
USP49-202ENST00000373010 RAD51AP1Q96B01 352 aa17.96■□□□□ 0.47
USP49-202ENST00000373010 HDAC8Q9BY41 377 aa17.96■□□□□ 0.47
USP49-202ENST00000373010 MYNNQ9NPC7 610 aa17.96■□□□□ 0.47
USP49-202ENST00000373010 CDH7Q9ULB5 785 aa17.96■□□□□ 0.47
USP49-202ENST00000373010 GMEB1Q9Y692 573 aa17.96■□□□□ 0.47
USP49-202ENST00000373010 FOXD2O60548 495 aaPredicted RBP17.96■□□□□ 0.46
USP49-202ENST00000373010 RYKP34925 604 aa17.96■□□□□ 0.46
USP49-202ENST00000373010 HPCAP84074 193 aa17.96■□□□□ 0.46
USP49-202ENST00000373010 PDE7AQ13946 482 aa17.96■□□□□ 0.46
USP49-202ENST00000373010 FAM180BQ6P0A1 224 aa17.96■□□□□ 0.46
USP49-202ENST00000373010 GOT1L1Q8NHS2 421 aaPredicted RBP17.96■□□□□ 0.46
USP49-202ENST00000373010 SETD7Q8WTS6 366 aaKnown RBP17.96■□□□□ 0.46
USP49-202ENST00000373010 REEP1Q9H902 201 aa17.96■□□□□ 0.46
USP49-202ENST00000373010 ATAD3AQ9NVI7 634 aa17.96■□□□□ 0.46
USP49-202ENST00000373010 ADPRHL2Q9NX46 363 aa17.96■□□□□ 0.46
USP49-202ENST00000373010 THUMPD1Q9NXG2 353 aaKnown RBP17.96■□□□□ 0.46
USP49-202ENST00000373010 BLOC1S6Q9UL45 172 aa17.96■□□□□ 0.46
USP49-202ENST00000373010 IL3P08700 152 aa17.95■□□□□ 0.46
USP49-202ENST00000373010 TNFRSF1BP20333 461 aa17.95■□□□□ 0.46
USP49-202ENST00000373010 CD247P20963 164 aa17.95■□□□□ 0.46
USP49-202ENST00000373010 KELP23276 732 aa17.95■□□□□ 0.46
USP49-202ENST00000373010 EPHA2P29317 976 aa17.95■□□□□ 0.46
USP49-202ENST00000373010 PIK3CBP42338 1070 aa17.95■□□□□ 0.46
USP49-202ENST00000373010 GABARAPL2P60520 117 aa17.95■□□□□ 0.46
USP49-202ENST00000373010 GRSF1Q12849 480 aaKnown RBP eCLIP17.95■□□□□ 0.46
USP49-202ENST00000373010 IL18R1Q13478 541 aa17.95■□□□□ 0.46
USP49-202ENST00000373010 C10orf62Q5T681 223 aaPredicted RBP17.95■□□□□ 0.46
USP49-202ENST00000373010 VITQ6UXI7 678 aa17.95■□□□□ 0.46
USP49-202ENST00000373010 ADAMTSL4Q6UY14 1074 aa17.95■□□□□ 0.46
USP49-202ENST00000373010 PIWIL3Q7Z3Z3 882 aaKnown RBP17.95■□□□□ 0.46
USP49-202ENST00000373010 TRIT1Q9H3H1 467 aaKnown RBP17.95■□□□□ 0.46
USP49-202ENST00000373010 THAP10Q9P2Z0 257 aaPredicted RBP17.95■□□□□ 0.46
USP49-202ENST00000373010 TAC3Q9UHF0 121 aa17.95■□□□□ 0.46
USP49-202ENST00000373010 GPR37L1O60883 481 aa17.94■□□□□ 0.46
USP49-202ENST00000373010 UGT2B11O75310 529 aa17.94■□□□□ 0.46
USP49-202ENST00000373010 FMO3P31513 532 aa17.94■□□□□ 0.46
USP49-202ENST00000373010 GJA4P35212 333 aa17.94■□□□□ 0.46
USP49-202ENST00000373010 DRD3P35462 400 aa17.94■□□□□ 0.46
USP49-202ENST00000373010 CYP4F2P78329 520 aa17.94■□□□□ 0.46
USP49-202ENST00000373010 CDK3Q00526 305 aa17.94■□□□□ 0.46
USP49-202ENST00000373010 TOP3AQ13472 1001 aaPredicted RBP17.94■□□□□ 0.46
USP49-202ENST00000373010 CAMK2GQ13555 558 aaPredicted RBP17.94■□□□□ 0.46
USP49-202ENST00000373010 PDGFRLQ15198 375 aa17.94■□□□□ 0.46
USP49-202ENST00000373010 WSCD2Q2TBF2 565 aa17.94■□□□□ 0.46
USP49-202ENST00000373010 LCTLQ6UWM7 567 aa17.94■□□□□ 0.46
USP49-202ENST00000373010 UBE2Q1Q7Z7E8 422 aa17.94■□□□□ 0.46
USP49-202ENST00000373010 FAM129CQ86XR2 697 aa17.94■□□□□ 0.46
USP49-202ENST00000373010 DCUN1D3Q8IWE4 304 aa17.94■□□□□ 0.46
USP49-202ENST00000373010 FBLIM1Q8WUP2 373 aa17.94■□□□□ 0.46
USP49-202ENST00000373010 KIF17Q9P2E2 1029 aa17.94■□□□□ 0.46
USP49-202ENST00000373010 DGKBQ9Y6T7 804 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms