RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 ATP5C1P36542 298 aaKnown RBP13.19□□□□□ -0.3
USP49-201ENST00000373006 P2RX3P56373 397 aa13.19□□□□□ -0.3
USP49-201ENST00000373006 MGAT3Q09327 533 aa13.19□□□□□ -0.3
USP49-201ENST00000373006 SSX1Q16384 188 aa13.19□□□□□ -0.3
USP49-201ENST00000373006 Q5BKY6 102 aa13.19□□□□□ -0.3
USP49-201ENST00000373006 UBE2R2Q712K3 238 aaPredicted RBP13.19□□□□□ -0.3
USP49-201ENST00000373006 SERINC5Q86VE9 423 aa13.19□□□□□ -0.3
USP49-201ENST00000373006 ATCAYQ86WG3 371 aa13.19□□□□□ -0.3
USP49-201ENST00000373006 PGBD3Q8N328 593 aa13.19□□□□□ -0.3
USP49-201ENST00000373006 DOHHQ9BU89 302 aa13.19□□□□□ -0.3
USP49-201ENST00000373006 ASPNQ9BXN1 380 aa13.19□□□□□ -0.3
USP49-201ENST00000373006 BARHL1Q9BZE3 327 aa13.19□□□□□ -0.3
USP49-201ENST00000373006 FAM8A1Q9UBU6 413 aa13.19□□□□□ -0.3
USP49-201ENST00000373006 WWP2O00308 870 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 FHP07954 510 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 CHRM5P08912 532 aaPredicted RBP13.18□□□□□ -0.3
USP49-201ENST00000373006 GABRB1P18505 474 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 ACRV1P26436 265 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 CRATP43155 626 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 GALK2Q01415 458 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 GANABQ14697 944 aaKnown RBP13.18□□□□□ -0.3
USP49-201ENST00000373006 FRG2Q64ET8 278 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 SPERTQ8NA61 448 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 UBTD2Q8WUN7 234 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 WBP2Q969T9 261 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 FRG2BQ96QU4 278 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 IL4I1Q96RQ9 567 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 RAD9AQ99638 391 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 RHCGQ9UBD6 479 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 MBD1Q9UIS9 605 aaPredicted RBP13.18□□□□□ -0.3
USP49-201ENST00000373006 PCDHB11Q9Y5F2 797 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 PCDH17O14917 1159 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 CSF2P04141 144 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 UBL4AP11441 157 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 POLR2EP19388 210 aaKnown RBP13.18□□□□□ -0.3
USP49-201ENST00000373006 CBLP22681 906 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 OLR1P78380 273 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 UBE3AQ05086 875 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 MTAPQ13126 283 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 MLIPQ5VWP3 458 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 BBS7Q8IWZ6 715 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 ST13P5Q8NFI4 369 aaPredicted RBP13.18□□□□□ -0.3
USP49-201ENST00000373006 SMURF1Q9HCE7 757 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 ABCB8Q9NUT2 735 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 DNMT3LQ9UJW3 386 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 KCNE1BA0A087WTH5 132 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 GLYATL1P3A0A0U1RQE8 302 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 LOC105371267A0A1B0GV96 52 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 BPIP17213 487 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 CORO1AP31146 461 aaKnown RBP13.18□□□□□ -0.3
USP49-201ENST00000373006 TIE1P35590 1138 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 ETV6P41212 452 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 CHIT1Q13231 466 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 GAB1Q13480 694 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 PTGES3Q15185 160 aaKnown RBP13.18□□□□□ -0.3
USP49-201ENST00000373006 MORN1Q5T089 497 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 ADNP2Q6IQ32 1131 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 GLB1LQ6UWU2 654 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 RNF165Q6ZSG1 346 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 GRAMD2AQ8IUY3 354 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 TMCO6Q96DC7 493 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 CCDC32Q9BV29 185 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 DYRK4Q9NR20 520 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 NPAP1Q9NZP6 1156 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 LHX3Q9UBR4 397 aa13.18□□□□□ -0.3
USP49-201ENST00000373006 A0A1W2PQ09 198 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 PRAMEF25A6NGN4 478 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 PLK4O00444 970 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 TRBC1P01850 177 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 RPS3P23396 243 aaKnown RBP eCLIP13.17□□□□□ -0.3
USP49-201ENST00000373006 CCR7P32248 378 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 HNF4AP41235 474 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 POU6F2P78424 691 aaPredicted RBP13.17□□□□□ -0.3
USP49-201ENST00000373006 SRSF11Q05519 484 aaKnown RBP13.17□□□□□ -0.3
USP49-201ENST00000373006 VEZF1Q14119 521 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 RGNQ15493 299 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 ZNF438Q7Z4V0 828 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 C2orf69Q8N8R5 385 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 PIH1D2Q8WWB5 315 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 ASB15Q8WXK1 588 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 MYO19Q96H55 970 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 TCF25Q9BQ70 676 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 DUSP26Q9BV47 211 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 GPR62Q9BZJ7 368 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 STMN3Q9NZ72 180 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 HCSTQ9UBK5 93 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 CLEC2DQ9UHP7 191 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 PLXNA4Q9HCM2 1894 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 SMIM30A4D0T7 59 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 MTMR11A4FU01 709 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 ERVH48-1M5A8F1 160 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 FZD6O60353 706 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 ETFAP13804 333 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 UQCRC1P31930 480 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 DDOSTP39656 456 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 SELENOWP63302 87 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 ZNF79Q15937 498 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 C5orf22Q49AR2 442 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 COX20Q5RI15 118 aa13.17□□□□□ -0.3
USP49-201ENST00000373006 CXorf57Q6NSI4 855 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms