RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 JUNP05412 331 aaKnown RBP14.81□□□□□ -0.04
COL5A1-201ENST00000371817 ACTBP60709 375 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 DSTNP60981 165 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 ACTG1P63261 375 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 GRIK4Q16099 956 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 DESI1Q6ICB0 168 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 NLRP8Q86W28 1048 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 HEBP1Q9NRV9 189 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 MAN2C1Q9NTJ4 1040 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 A0A0A6YYH2 397 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 A6NJ64 397 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 NCBP2P52298 156 aaKnown RBP eCLIP14.81□□□□□ -0.04
COL5A1-201ENST00000371817 CD47Q08722 323 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 NFATC4Q14934 902 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 GPR151Q8TDV0 419 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 YIPF4Q9BSR8 244 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 DPEP2Q9H4A9 486 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 MT-ND2P03891 347 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 NMBRP28336 390 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 CHRNA4P43681 627 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 BIRC7Q96CA5 298 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 TMEM134Q9H6X4 195 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 PLCXD1Q9NUJ7 323 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 A0A0U1RQK1 487 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 PRSS44E7EML9 344 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 ZNF701M0R085 212 aaPredicted RBP14.81□□□□□ -0.04
COL5A1-201ENST00000371817 LRRTM2O43300 516 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 HCRTR2O43614 444 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 IFNGR1P15260 489 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 NR4A2P43354 598 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 RNF4P78317 190 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 ODF4Q2M2E3 257 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 EARS2Q5JPH6 523 aaKnown RBP14.81□□□□□ -0.04
COL5A1-201ENST00000371817 C12orf29Q8N999 325 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 UPF1Q92900 1129 aaKnown RBP eCLIP14.81□□□□□ -0.04
COL5A1-201ENST00000371817 TGIF2Q9GZN2 237 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 PORCNQ9H237 461 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 HCN4Q9Y3Q4 1203 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 ABCC3O15438 1527 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 CAPN15O75808 1086 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 SOX14O95416 240 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 LSSP48449 732 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 ATP6AP1Q15904 470 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 EPGNQ6UW88 154 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 ADAM2Q99965 735 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 ROBO3Q96MS0 1386 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 TCRBV7S2A1N4TA0A589 114 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 WASHC1A8K0Z3 465 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 DCNP07585 359 aaKnown RBP14.81□□□□□ -0.04
COL5A1-201ENST00000371817 SLC35G6P0C7Q6 338 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 PPP4CP60510 307 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 KCNIP4Q6PIL6 250 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 GPAT4Q86UL3 456 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 TMEM139Q8IV31 216 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 ZFP82Q8N141 532 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 NATD1Q8N6N6 113 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 TCEANCQ8N8B7 351 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 HAS2Q92819 552 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 MRPS5P82675 430 aaKnown RBP14.81□□□□□ -0.04
COL5A1-201ENST00000371817 TANGO2Q6ICL3 276 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 DPF1Q92782 380 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 OR51E2Q9H255 320 aa14.81□□□□□ -0.04
COL5A1-201ENST00000371817 ZNF726A6NNF4 738 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 TTLL8A6PVC2 850 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 OR1F1O43749 312 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 INSRRP14616 1297 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 AKR1C4P17516 323 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 AMY2BP19961 511 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 SPAM1P38567 509 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 AQP2P41181 271 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 C6orf141Q5SZD1 244 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 GRHL3Q8TE85 626 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 F5H5P2 479 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 XYLBO75191 536 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 MT-CO2P00403 227 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 WDR4P57081 412 aaKnown RBP14.8□□□□□ -0.04
COL5A1-201ENST00000371817 NIPAL4Q0D2K0 466 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 PPP1R8Q12972 351 aaKnown RBP14.8□□□□□ -0.04
COL5A1-201ENST00000371817 WASH6PQ9NQA3 447 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 MAGEB4O15481 346 aaPredicted RBP14.8□□□□□ -0.04
COL5A1-201ENST00000371817 PAGE1O75459 146 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 PTGIRP43119 386 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 ST3GAL3Q11203 375 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 CMPK2Q5EBM0 449 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 DCAKDQ8WVC6 231 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 NELL2Q99435 816 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 TMEM248Q9NWD8 314 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 H3BSH0 61 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 NDST3O95803 873 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 HPRP00739 348 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 SBK2P0C263 348 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 TGFB2P61812 414 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 ENPP2Q13822 863 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 TAF1CQ15572 869 aaPredicted RBP14.8□□□□□ -0.04
COL5A1-201ENST00000371817 WSCD1Q658N2 575 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 GLT8D1Q68CQ7 371 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 SLC8B1Q6J4K2 584 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 SLC51AQ86UW1 340 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 GLIS3Q8NEA6 775 aa14.8□□□□□ -0.04
COL5A1-201ENST00000371817 CNIH3Q8TBE1 160 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms